RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 A0A1B0GU03 582 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 MPTX1A8MV57 137 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 RNF223E7ERA6 249 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 APOA2P02652 100 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 ARHGDIBP52566 201 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 DLX1P56177 255 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 LINC00205P59089 165 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 ZBTB8BQ8NAP8 495 aaPredicted RBP12.27□□□□□ -0.45
COL4A5-203ENST00000470339 HYLS1Q96M11 299 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 Q96MF0 132 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 MRPL20Q9BYC9 149 aaKnown RBP12.27□□□□□ -0.45
COL4A5-203ENST00000470339 ZFP57Q9NU63 452 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.45
COL4A5-203ENST00000470339 MMP24Q9Y5R2 645 aa12.27□□□□□ -0.45
COL4A5-203ENST00000470339 FAM90A9PA6NNJ1 464 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 H0YJW9 148 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 J3QLI3 93 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 SNAPC5O75971 98 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 S1PR2O95136 353 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 HRASP01112 189 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 IGKV1-5P01602 117 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 P0C879 139 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 NQO2P16083 231 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 GZMKP49863 264 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 RAB13P51153 203 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 POU2AF1Q16633 256 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 MIDNQ504T8 468 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 OR2B11Q5JQS5 317 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 TPTE2P1Q5T6R2 138 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 NOXA1Q86UR1 476 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 PDPNQ86YL7 162 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 OR8H3Q8N146 312 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 RPEQ96AT9 228 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 SLC35D1Q9NTN3 355 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 COA4Q9NYJ1 87 aa12.26□□□□□ -0.45
COL4A5-203ENST00000470339 VPS13CQ709C8 3753 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 CYSRT1A8MQ03 144 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 G3V3Q6 166 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 BOLA2-SMG1P6H3BVE0 249 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 PSMB6P28072 239 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 AKR1C2P52895 323 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 LGALS4P56470 323 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 KLRD1Q13241 179 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 THOC7Q6I9Y2 204 aaKnown RBP12.25□□□□□ -0.45
COL4A5-203ENST00000470339 RNASE11Q8TAA1 199 aaKnown RBP12.25□□□□□ -0.45
COL4A5-203ENST00000470339 OSR1Q8TAX0 266 aaPredicted RBP12.25□□□□□ -0.45
COL4A5-203ENST00000470339 PPP1R1CQ8WVI7 109 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 LHX4Q969G2 390 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 GPR146Q96CH1 333 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 R3HDM4Q96D70 268 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 WDR89Q96FK6 387 aaPredicted RBP12.25□□□□□ -0.45
COL4A5-203ENST00000470339 HIF1ANQ9NWT6 349 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 GSKIPQ9P0R6 139 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 WASHC3Q9Y3C0 194 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 AUP1Q9Y679 476 aa12.25□□□□□ -0.45
COL4A5-203ENST00000470339 IGHV1-3A0A0C4DH29 117 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 MARCH11A6NNE9 402 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 PITX3O75364 302 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 CRYZL1O95825 349 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 KRASP01116 189 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 PET100P0DJ07 73 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 REG1BP48304 166 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 ERVK-16P61578 105 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 PRB3Q04118 309 aaPredicted RBP12.24□□□□□ -0.45
COL4A5-203ENST00000470339 DIAPH2-AS1Q14236 149 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 SMCO1Q147U7 214 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 TMEM249Q2WGJ8 235 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 TMEM177Q53S58 311 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 CCDC144NLQ6NUI1 221 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 H2BFWTQ7Z2G1 175 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 OR4D5Q8NGN0 318 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 OR4C13Q8NGP0 309 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 MALSU1Q96EH3 234 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 CACFD1Q9UGQ2 172 aa12.24□□□□□ -0.45
COL4A5-203ENST00000470339 CSMD2Q7Z408 3487 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 CENPVL3A0A0U1RRI6 287 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 HMSDA8MTL9 139 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 SMLR1H3BR10 107 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 MPC2O95563 127 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 IGHV4-31P0DP07 118 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 SLC25A4P12235 298 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 G6PCP35575 357 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 EIF2B2P49770 351 aaKnown RBP12.23□□□□□ -0.45
COL4A5-203ENST00000470339 HABP2Q14520 560 aaPredicted RBP12.23□□□□□ -0.45
COL4A5-203ENST00000470339 Q5BKY6 102 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 LDLRAD2Q5SZI1 272 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 TMEM65Q6PI78 240 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 FLYWCH2Q96CP2 140 aaKnown RBP12.23□□□□□ -0.45
COL4A5-203ENST00000470339 RNF5Q99942 180 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 C7orf69Q9H7B7 122 aa12.23□□□□□ -0.45
COL4A5-203ENST00000470339 TRAV14DV4A0A0A6YYC5 116 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 A0A1W2PPI3 338 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 FAM90A26D6RGX4 464 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 H7C2Y5 167 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 NPFFO15130 113 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 ST8SIA3O43173 380 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 RLN2P04090 185 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 LYL1P12980 280 aa12.22□□□□□ -0.45
COL4A5-203ENST00000470339 CD1BP29016 333 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms