RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ZNF48Q96MX3 618 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-207ENST00000469334 NUDT22Q9BRQ3 303 aa7.61□□□□□ -1.19
SMARCE1-207ENST00000469334 TMEM70Q9BUB7 260 aa7.61□□□□□ -1.19
SMARCE1-207ENST00000469334 MS4A6AQ9H2W1 248 aa7.61□□□□□ -1.19
SMARCE1-207ENST00000469334 GP6Q9HCN6 339 aa7.61□□□□□ -1.19
SMARCE1-207ENST00000469334 OSTCQ9NRP0 149 aa7.61□□□□□ -1.19
SMARCE1-207ENST00000469334 NCOA6Q14686 2063 aaPredicted RBP7.61□□□□□ -1.19
SMARCE1-207ENST00000469334 TRBV6-6A0A0A6YYG2 114 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 SCO2A0A1W2PP80 73 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 A0A1W2PPV4 95 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 C2orf70A6NJV1 201 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 K7EN84 100 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 M0R2Z0 102 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 TNFSF11O14788 317 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 OR7C1O76099 320 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 IGKV1-39P01597 117 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 APCSP02743 223 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 IGKV1D-39P04432 117 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 SCTP09683 121 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 PTGDSP41222 190 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 TFF3Q07654 80 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 C10orf128Q5T292 105 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 LHX8Q68G74 356 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.6□□□□□ -1.192e-7■■□□□ 13.5
SMARCE1-207ENST00000469334 WFDC8Q8IUA0 241 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 FAM19A2Q8N3H0 131 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 OR1N2Q8NGR9 330 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 OR51H1Q8NH63 302 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 WIPF2Q8TF74 440 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 EAF1Q96JC9 268 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 OXGR1Q96P68 337 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 FBRSQ9HAH7 460 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 SAP30LQ9HAJ7 183 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 MMP17Q9ULZ9 603 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 ARL2-SNX15V9GYD0 113 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 ARHGEF17Q96PE2 2063 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 IGKV3D-11A0A0A0MRZ8 115 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 OR4C46A6NHA9 309 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 MANSC4A6NHS7 340 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 PMS2P5A8MQ11 134 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 NPIPB11E5RHQ5 1161 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 J3QW42 95 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 K7EP34 96 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 MPDU1O75352 247 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 CCL7P80098 99 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 C17orf67Q0P5P2 114 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 SLC25A53Q5H9E4 307 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 RHBDD2Q6NTF9 364 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 EBLN2Q6P2I7 272 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 DTX1Q86Y01 620 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 ZNF441Q8N8Z8 693 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 OR1K1Q8NGR3 316 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 CCL4L1Q8NHW4 92 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 GPHA2Q96T91 129 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 COPS7AQ9UBW8 275 aa7.6□□□□□ -1.19
SMARCE1-207ENST00000469334 ZNF816-ZNF321PA0A0X1KG74 233 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 C7orf71A4D174 169 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 HAND1O96004 215 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 CELA3BP08861 270 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 STAG3L2P0CL84 134 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 STAG3L3P0CL85 134 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 CA7P43166 264 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 ARF1P84077 181 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 ZNF718Q3SXZ3 478 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 CARD17Q5XLA6 110 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 ZNF776Q68DI1 518 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 ZDHHC23Q8IYP9 409 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 TMEM191AQ9H0A3 160 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 GPR27Q9NS67 375 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 LTBP2Q14767 1821 aa7.59□□□□□ -1.19
SMARCE1-207ENST00000469334 ARHGAP21Q5T5U3 1957 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 IGKV1-6A0A0C4DH72 117 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 KIR2DS5A0A0G2JLQ3 304 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 A0A0G2JNG1 304 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 C9orf118A6NHY6 69 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 G3V3Y1 287 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 H3BRM9 83 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 KIR2DS3K7RE56 304 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 AREGP15514 252 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 KIR2DS5Q14953 304 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 IZUMO4Q1ZYL8 232 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 RSPO1Q2MKA7 263 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 TMEM108Q6UXF1 575 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 SFTPA1Q8IWL2 248 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 UBALD2Q8IYN6 164 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 OR10W1Q8NGF6 305 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 TMEM45BQ96B21 275 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 CLDN23Q96B33 292 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 SIGMAR1Q99720 223 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 PPIAL4EA0A075B759 164 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 PPIAL4CA0A0B4J2A2 164 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 SMIM27A0A1W2PRY6 76 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 IZUMO1RA6ND01 250 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 PPIAL4DF5H284 164 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 GNG7O60262 68 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 SMPD2O60906 423 aa7.58□□□□□ -1.2
SMARCE1-207ENST00000469334 PPIAL4FP0DN26 164 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms