RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 KIAA1456Q9P272 454 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 PITPNC1Q9UKF7 332 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 GPR132Q9UNW8 380 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 FLVCR2Q9UPI3 526 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 SONP18583 2426 aaKnown RBP6.56□□□□□ -1.36
HDAC6-216ENST00000468949 ARHGAP32A7KAX9 2087 aa6.56□□□□□ -1.36
HDAC6-216ENST00000468949 JMJD1CQ15652 2540 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 MDFIC2A0A1B0GVS7 189 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 CRYM-AS1A6NIL9 109 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 INMT-MINDY4F8WBC2 141 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 H0YJW9 148 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 LY6LH3BQJ8 138 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 H3BUX3 64 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 SHOXO15266 292 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 CRYZL1O95825 349 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 MOSP00540 346 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 IGKV1D-33P01593 117 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 IGKV1-33P01594 117 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 SNRNP70P08621 437 aaKnown RBP6.55□□□□□ -1.36
HDAC6-216ENST00000468949 OR5AC1P0C628 307 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 CT45A6P0DMU7 189 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 CT45A5P0DMU8 189 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 CT45A7P0DMV0 189 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 ANXA7P20073 488 aaKnown RBP6.55□□□□□ -1.36
HDAC6-216ENST00000468949 F2RP25116 425 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 CD1BP29016 333 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 AKR1C2P52895 323 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 RPS16P62249 146 aaKnown RBP6.55□□□□□ -1.36
HDAC6-216ENST00000468949 DHODHQ02127 395 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 DIAPH2-AS1Q14236 149 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 MMDQ15546 238 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 SLC9A3R2Q15599 337 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 CCBE1Q6UXH8 406 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-216ENST00000468949 SLC25A42Q86VD7 318 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 LDLRAD3Q86YD5 345 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 ZNF695Q8IW36 515 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 ZNF383Q8NA42 475 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 ADAD2Q8NCV1 583 aaKnown RBP6.55□□□□□ -1.36
HDAC6-216ENST00000468949 DUSP18Q8NEJ0 188 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 DMBX1Q8NFW5 382 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 OR4C13Q8NGP0 309 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 OR2T10Q8NGZ9 312 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 OR5R1Q8NH85 324 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 C17orf50Q8WW18 174 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 SSMEM1Q8WWF3 244 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 ST6GALNAC6Q969X2 333 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 MRGPRFQ96AM1 343 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 FLYWCH2Q96CP2 140 aaKnown RBP6.55□□□□□ -1.36
HDAC6-216ENST00000468949 C5orf30Q96GV9 206 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 JMJD8Q96S16 334 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 GPHA2Q96T91 129 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 TSNAXQ99598 290 aaKnown RBP6.55□□□□□ -1.36
HDAC6-216ENST00000468949 SSX3Q99909 188 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 RTBDNQ9BSG5 229 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-216ENST00000468949 TNFRSF19Q9NS68 423 aa6.55□□□□□ -1.36
HDAC6-216ENST00000468949 WNK2Q9Y3S1 2297 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 NCBP2LA6PVI3 153 aaKnown RBP6.54□□□□□ -1.36
HDAC6-216ENST00000468949 LINC00473A8K010 186 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 RBFOX2O43251 390 aaKnown RBP eCLIP6.54□□□□□ -1.36
HDAC6-216ENST00000468949 CREBL2O60519 120 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-216ENST00000468949 RBMXL2O75526 392 aaKnown RBP6.54□□□□□ -1.36
HDAC6-216ENST00000468949 VENTXO95231 258 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 HPRT1P00492 218 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 HRASP01112 189 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 IGLV2-14P01704 120 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 OR4E1P0C645 316 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 RPA2P15927 270 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 PAX6P26367 422 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 DYNLT3P51808 116 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 RAG2P55895 527 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 PPP1R1AQ13522 171 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 HNF4GQ14541 408 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 AANATQ16613 207 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 VMA21Q3ZAQ7 101 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 LYG2Q86SG7 212 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-216ENST00000468949 LGI3Q8N145 548 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 DYNAPQ8N1N2 210 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 SIGLECL1Q8N7X8 197 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 OR5AN1Q8NGI8 311 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 VSTM2AQ8TAG5 236 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 OSR1Q8TAX0 266 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-216ENST00000468949 RRNAD1Q96FB5 475 aaKnown RBP6.54□□□□□ -1.36
HDAC6-216ENST00000468949 PHB2Q99623 299 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 MEGF9Q9H1U4 602 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 RAB18Q9NP72 206 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 C1RLQ9NZP8 487 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 COMMD9Q9P000 198 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 DNHD1Q96M86 4753 aa6.54□□□□□ -1.36
HDAC6-216ENST00000468949 HOXA3O43365 443 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-216ENST00000468949 SSNA1O43805 119 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 S1PR2O95136 353 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 SFT2D2O95562 160 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 NQO2P16083 231 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 CD24P25063 80 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 LPAR6P43657 344 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 RPL30P62888 115 aaKnown RBP6.53□□□□□ -1.36
HDAC6-216ENST00000468949 DHRS2Q13268 280 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 LY6EQ16553 131 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 SP6Q3SY56 376 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms