RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SCGB3A2Q96PL1 93 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 YPEL2Q96QA6 119 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 FOXC2Q99958 501 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 SEC22CQ9BRL7 303 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 CABLES2Q9BTV7 478 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 FXYD6Q9H0Q3 95 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 C20orf85Q9H1P6 137 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 OR2D2Q9H210 308 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM133Q9H2Q1 129 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 NUDT15Q9NV35 164 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 HIF1ANQ9NWT6 349 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 COPZ2Q9P299 210 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF221Q9UK13 617 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 GPR132Q9UNW8 380 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 VSIG4Q9Y279 399 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 OR2W1Q9Y3N9 320 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 NUBP2Q9Y5Y2 271 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 SESN1Q9Y6P5 492 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 HRNRQ86YZ3 2850 aaPredicted RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 USP9YO00507 2555 aaPredicted RBP3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 LRRK2Q5S007 2527 aa3.31□□□□□ -1.88
TMEM39A-204ENST00000468545 LRBAP50851 2863 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 ADGRG4Q8IZF6 3080 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 IGHV2-26A0A0B4J1V2 119 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 A0A1B0GVG6 124 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 SH2D7A6NKC9 451 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 J3QR06 171 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 M0R1W7 72 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 M0R1X1 148 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 GPR31O00270 319 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 PGLYRP1O75594 196 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 NDUFB6O95139 128 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 ARG1P05089 322 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 CTSDP07339 412 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 MSMBP08118 114 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 OR4E1P0C645 316 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 IGHV4-31P0DP07 118 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 RPA2P15927 270 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 PRTN3P24158 256 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 PAX6P26367 422 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 S100GP29377 79 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 GNRHRP30968 328 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 PIGPP57054 158 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 LINC00205P59089 165 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 UBE2MP61081 183 aaKnown RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 PAX5Q02548 391 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 LOXL1Q08397 574 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC9A3R2Q15599 337 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM249Q2WGJ8 235 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 SP6Q3SY56 376 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 Q3ZCU0 254 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 RPL39P5Q59GN2 51 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 OR2B11Q5JQS5 317 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM268Q5VZI3 342 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF660Q6AZW8 331 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 LPCAT3Q6P1A2 487 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 HEPN1Q6WQI6 88 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 GLDNQ6ZMI3 551 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF818PQ6ZRF7 136 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 KCTD9Q7L273 389 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 ZNF554Q86TJ5 538 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 TBC1D26Q86UD7 250 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 LHFPL1Q86WI0 220 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 CMTM1Q8IZ96 169 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC38A6Q8IZM9 456 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 C11orf42Q8N5U0 333 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 ZDHHC22Q8N966 263 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 DRAXINQ8NBI3 349 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 MINDY2Q8NBR6 621 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 OR10A7Q8NGE5 316 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 OR52B4Q8NGK2 314 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 OR52M1Q8NGK5 317 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 OR51H1Q8NH63 302 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 OR9G1Q8NH87 305 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 C8orf46Q8TAG6 207 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 CHPT1Q8WUD6 406 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 CAPSLQ8WWF8 208 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 MRGPRFQ96AM1 343 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 TMEM186Q96B77 213 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 UPRTQ96BW1 309 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 MOB3AQ96BX8 217 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 TBX15Q96SF7 602 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 SLC25A21Q9BQT8 299 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 RTBDNQ9BSG5 229 aaPredicted RBP3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 CLEC7AQ9BXN2 247 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 C5orf66Q9H5L9 145 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 HEXA-AS1Q9H8Q6 139 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 YAE1D1Q9NRH1 226 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 JPT1Q9UK76 154 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 KCNIP3Q9Y2W7 256 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 HILPDAQ9Y5L2 63 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 INSIG2Q9Y5U4 225 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 KPTNQ9Y664 436 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 AUP1Q9Y679 476 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 ARHGAP32A7KAX9 2087 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 ARID1AO14497 2285 aa3.3□□□□□ -1.88
TMEM39A-204ENST00000468545 PRRC2AP48634 2157 aaKnown RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 GCN1Q92616 2671 aaKnown RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 HELZ2Q9BYK8 2649 aaKnown RBP3.29□□□□□ -1.88
TMEM39A-204ENST00000468545 SPG11Q96JI7 2443 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms