RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 TMEM267Q0VDI3 215 aaPredicted RBP13.58□□□□□ -0.24
CLDN11-202ENST00000468358 TMEM177Q53S58 311 aa13.58□□□□□ -0.24
CLDN11-202ENST00000468358 TCTEX1D2Q8WW35 142 aa13.58□□□□□ -0.24
CLDN11-202ENST00000468358 FAM103A1Q9BTL3 118 aaKnown RBP13.58□□□□□ -0.24
CLDN11-202ENST00000468358 TAS2R8Q9NYW2 309 aa13.58□□□□□ -0.24
CLDN11-202ENST00000468358 EHFQ9NZC4 300 aa13.58□□□□□ -0.24
CLDN11-202ENST00000468358 FBXO7Q9Y3I1 522 aa13.58□□□□□ -0.24
CLDN11-202ENST00000468358 MEGF8Q7Z7M0 2845 aa13.58□□□□□ -0.24
CLDN11-202ENST00000468358 PPYP01298 95 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 HERV-K104P61576 105 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 VMA21Q3ZAQ7 101 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 PPP1R27Q86WC6 154 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 TMEM17Q86X19 198 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 OR5H2Q8NGV7 314 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 GRPEL2Q8TAA5 225 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 DDB2Q92466 427 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 ARPC1AQ92747 370 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 SLC5A7Q9GZV3 580 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 CCL28Q9NRJ3 127 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 NOTCH3Q9UM47 2321 aa13.57□□□□□ -0.24
CLDN11-202ENST00000468358 TNFSF12O43508 249 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 IGLV2-23P01705 113 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 PMP2P02689 132 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 PSMB8P28062 276 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 PPIFP30405 207 aaKnown RBP13.56□□□□□ -0.24
CLDN11-202ENST00000468358 SLC6A1P30531 599 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 RAB25P57735 213 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 TAS2R46P59540 309 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 FXYD3Q14802 87 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 SPCS2Q15005 226 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 OXLD1Q5BKU9 147 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 UNQ5815/PRO19632Q6UWF5 114 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 ZNF562Q6V9R5 426 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 RAB2BQ8WUD1 216 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 DUX3Q96PT4 197 aa13.56□□□□□ -0.24
CLDN11-202ENST00000468358 HSD17B10Q99714 261 aaKnown RBP13.56□□□□□ -0.24
CLDN11-202ENST00000468358 FOXA2Q9Y261 457 aaPredicted RBP13.56□□□□□ -0.24
CLDN11-202ENST00000468358 RGS5O15539 181 aa13.55□□□□□ -0.24
CLDN11-202ENST00000468358 RPL5P46777 297 aaKnown RBP13.55□□□□□ -0.24
CLDN11-202ENST00000468358 RFX2P48378 723 aa13.55□□□□□ -0.24
CLDN11-202ENST00000468358 RPL30P62888 115 aaKnown RBP13.55□□□□□ -0.24
CLDN11-202ENST00000468358 DEFB136Q30KP8 78 aa13.55□□□□□ -0.24
CLDN11-202ENST00000468358 ACTBL2Q562R1 376 aa13.55□□□□□ -0.24
CLDN11-202ENST00000468358 RNASE12Q5GAN4 147 aaKnown RBP13.55□□□□□ -0.24
CLDN11-202ENST00000468358 TCTEX1D1Q8N7M0 179 aa13.55□□□□□ -0.24
CLDN11-202ENST00000468358 LFNGQ8NES3 379 aa13.55□□□□□ -0.24
CLDN11-202ENST00000468358 OSR1Q8TAX0 266 aaPredicted RBP13.55□□□□□ -0.24
CLDN11-202ENST00000468358 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
CLDN11-202ENST00000468358 EXTL2Q9UBQ6 330 aa13.55□□□□□ -0.24
CLDN11-202ENST00000468358 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
CLDN11-202ENST00000468358 IGLV2-14P01704 120 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 IGLL1P15814 213 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 HLA-DMAP28067 261 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 CD40LGP29965 261 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 CDX1P47902 265 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-202ENST00000468358 PJVKQ0ZLH3 352 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 SAMD5Q5TGI4 173 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 ZNF66Q6ZN08 573 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 ETV3LQ6ZN32 361 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 IDO2Q6ZQW0 420 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 MFSD4AQ8N468 514 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 RNF152Q8N8N0 203 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 OR4S2Q8NH73 311 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 GPX8Q8TED1 209 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 CASTOR1Q8WTX7 329 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 GIMAP1Q8WWP7 306 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 ZNF2Q9BSG1 426 aaPredicted RBP13.54□□□□□ -0.24
CLDN11-202ENST00000468358 KLK15Q9H2R5 256 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 SCPEP1Q9HB40 452 aa13.54□□□□□ -0.24
CLDN11-202ENST00000468358 IGLV1-40P01703 118 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 HRH1P35367 487 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 MYCNOSP40205 109 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 CRIP2P52943 208 aaPredicted RBP13.53□□□□□ -0.24
CLDN11-202ENST00000468358 TMBIM6P55061 237 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 UBE2KP61086 200 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 TNXAQ16473 311 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 OVCH2Q7RTZ1 564 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 MRPL41Q8IXM3 137 aaKnown RBP13.53□□□□□ -0.24
CLDN11-202ENST00000468358 LINC00482Q8N8I6 264 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 MINDY2Q8NBR6 621 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 PHB2Q99623 299 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 ZNF355PQ9NSJ1 428 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 SCOCQ9UIL1 159 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 ANAPC10Q9UM13 185 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 NUBP2Q9Y5Y2 271 aa13.53□□□□□ -0.24
CLDN11-202ENST00000468358 CCL24O00175 119 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 ARPC1BO15143 372 aaKnown RBP13.52□□□□□ -0.25
CLDN11-202ENST00000468358 SOX15O60248 233 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 ACTL6BO94805 426 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 CRYGBP07316 175 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 SAA1P0DJI8 122 aaPredicted RBP13.52□□□□□ -0.25
CLDN11-202ENST00000468358 EGR2P11161 476 aaPredicted RBP13.52□□□□□ -0.25
CLDN11-202ENST00000468358 NAT1P18440 290 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 RCVRNP35243 200 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 RAB9AP51151 201 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 TSPAN5P62079 268 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 CATR1Q13166 79 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 DYRK1AQ13627 763 aa13.52□□□□□ -0.25
CLDN11-202ENST00000468358 BEAN1Q3B7T3 259 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms