RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ABCA4P78363 2273 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 SNAI2O43623 268 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 PROP1O75360 226 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 C1QBP02746 253 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 PGAM2P15259 253 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 TMEM33P57088 247 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 ERVFRD-1P60508 538 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 RND3P61587 244 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 OR5D13Q8NGL4 314 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 RFESDQ8TAC1 157 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 ZFAND1Q8TCF1 268 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 GLYATL2Q8WU03 294 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 C14orf79Q96F83 325 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 TRAV25A0A0B4J276 109 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 CD34P28906 385 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 GLP1RP43220 463 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 BRWD1-AS2P59051 145 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 SP6Q3SY56 376 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 C1orf87Q8N0U7 546 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 C11orf42Q8N5U0 333 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 RTN4IP1Q8WWV3 396 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-208ENST00000468300 GALMQ96C23 342 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 SCGB3A2Q96PL1 93 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 NAA60Q9H7X0 242 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 GFOD1Q9NXC2 390 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 URGCP-MRPS24S4R325 110 aa6.81□□□□□ -1.32
BRCA1-208ENST00000468300 TRAV14DV4A0A0A6YYC5 116 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 IGHV3-43A0A0B4J1X8 118 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 A0A0B4J2A0 478 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 A0A1B0GV72 72 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 SIVA1O15304 175 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 MPPED1O15442 326 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 PGLYRP1O75594 196 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-208ENST00000468300 OR5AC1P0C628 307 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 IGHV3-43DP0DP04 118 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 ANXA3P12429 323 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 PPP1CCP36873 323 aaKnown RBP6.8□□□□□ -1.32
BRCA1-208ENST00000468300 CDKN1AP38936 164 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 GZMKP49863 264 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 DLX6P56179 175 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 UBE2KP61086 200 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 RAB11AP62491 216 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 IL15RAQ13261 267 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 GUK1Q16774 197 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 NOXA1Q86UR1 476 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 OR10V1Q8NGI7 309 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 C2CD4CQ8TF44 421 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 SCARB1Q8WTV0 552 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 CASTOR1Q8WTX7 329 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 SECTM1Q8WVN6 248 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 ARL11Q969Q4 196 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 UBTD1Q9HAC8 227 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 SHPKQ9UHJ6 478 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 CXorf65A6NEN9 183 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 DVL1O14640 695 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 HSD17B6O14756 317 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 CD5P06127 495 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 WNT2P09544 360 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 GIPP09681 153 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-208ENST00000468300 OMGP23515 440 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 EDDM3BP56851 147 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 MORN2Q502X0 79 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 TBC1D26Q86UD7 250 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 LRTM2Q8N967 370 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 C18orf12Q96KH6 178 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 CALYQ9NYX4 217 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 SLC25A10Q9UBX3 287 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-208ENST00000468300 C14orf166Q9Y224 244 aaKnown RBP6.8□□□□□ -1.32
BRCA1-208ENST00000468300 TNFRSF18Q9Y5U5 241 aa6.8□□□□□ -1.32
BRCA1-208ENST00000468300 KBTBD11-OT1A0A1B0GTJ5 212 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 DAOP14920 347 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 CRYBA4P53673 196 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 TMEM200BQ69YZ2 307 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 ZNF439Q8NDP4 499 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 OR10W1Q8NGF6 305 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 OR10C1Q96KK4 312 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 FAM210BQ96KR6 192 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 PHB2Q99623 299 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 C1orf43Q9BWL3 253 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 CHIAQ9BZP6 476 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 MS4A7Q9GZW8 240 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-208ENST00000468300 KCNIP1Q9NZI2 227 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 CLN8Q9UBY8 286 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 KPTNQ9Y664 436 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 GPR31O00270 319 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 PAX6P26367 422 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 ATP5IP56385 69 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-208ENST00000468300 HERV-K104P61576 105 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 TLE4Q04727 773 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 GAGE1Q13065 139 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 ODF3L1Q8IXM7 274 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 UXS1Q8NBZ7 420 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 NEU4Q8WWR8 484 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-208ENST00000468300 CFHR4Q92496 578 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 RAB9BQ9NP90 201 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 MYO18BQ8IUG5 2567 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-208ENST00000468300 TNFSF12O43508 249 aa6.79□□□□□ -1.32
BRCA1-208ENST00000468300 F12P00748 615 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-208ENST00000468300 DDTP30046 118 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms