RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 FAM3DQ96BQ1 224 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 SULT4A1Q9BR01 284 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 TMEM59Q9BXS4 323 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 CHIAQ9BZP6 476 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 CST11Q9H112 138 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 ZNF696Q9H7X3 374 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 ZNF286AQ9HBT8 521 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 CALYQ9NYX4 217 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 PEX16Q9Y5Y5 336 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 V9GY05 133 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 ATRQ13535 2644 aa4.01□□□□□ -1.77
U2AF1-207ENST00000468039 A0A075B6Q4 140 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 SAA2-SAA4A0A096LPE2 208 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 IGHV2-26A0A0B4J1V2 119 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 IGHV3-43A0A0B4J1X8 118 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 TRAV1-2A0A0B4J238 106 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 KBTBD11-OT1A0A1B0GTJ5 212 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 A0A1W2PPE3 182 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 FUOMA2VDF0 154 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 IFITM5A6NNB3 132 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 ODF3BA8MYP8 253 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 MCRIP1C9JLW8 97 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 PRSS46E5RG02 174 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 AIPO00170 330 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 PDCD5O14737 125 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 SOCS1O15524 211 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 PDCD6O75340 191 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 PAHP00439 452 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 MT-ND4P03905 459 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 FBP1P09467 338 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 UBBP0CG47 229 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 IGHV3-43DP0DP04 118 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 CD37P11049 281 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 RCC1P18754 421 aaPredicted RBP4□□□□□ -1.77
U2AF1-207ENST00000468039 RAB3BP20337 219 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 SDC2P34741 201 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 VEGFCP49767 419 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 ACTG1P63261 375 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 RBM39Q14498 530 aaKnown RBP4□□□□□ -1.77
U2AF1-207ENST00000468039 MOGAT2Q3SYC2 334 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 SLC35E4Q6ICL7 350 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 CD164L2Q6UWJ8 174 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 ZNF497Q6ZNH5 498 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 C18orf65Q6ZTR6 163 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 USP43Q70EL4 1123 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 C6orf201Q7Z4U5 140 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 GPR141Q7Z602 305 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 STHQ8IWL8 128 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 ZNF114Q8NC26 417 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 OR13D1Q8NGV5 346 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 OR1L1Q8NH94 360 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 KCNG3Q8TAE7 436 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 NDNFQ8TB73 568 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 THAP6Q8TBB0 222 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 MRPL30Q8TCC3 161 aaKnown RBP4□□□□□ -1.77
U2AF1-207ENST00000468039 TMEM158Q8WZ71 300 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 YIPF6Q96EC8 236 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 MRPS24Q96EL2 167 aaKnown RBP4□□□□□ -1.77
U2AF1-207ENST00000468039 KCTD7Q96MP8 289 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 HDHD3Q9BSH5 251 aaPredicted RBP4□□□□□ -1.77
U2AF1-207ENST00000468039 FAAP24Q9BTP7 215 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 TM2D1Q9BX74 207 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 BARHL1Q9BZE3 327 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 LPAR5Q9H1C0 372 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 TMEM133Q9H2Q1 129 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 GAL3ST2Q9H3Q3 398 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 HEXA-AS1Q9H8Q6 139 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 VCX3AQ9NNX9 186 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 RAB9BQ9NP90 201 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 IDI2-AS1Q9NZ38 188 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 GHRLQ9UBU3 117 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 DAPK2Q9UIK4 370 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 SSR3Q9UNL2 185 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 TRRAPQ9Y4A5 3859 aa4□□□□□ -1.77
U2AF1-207ENST00000468039 ZNF729A6NN14 1252 aaPredicted RBP3.99□□□□□ -1.77
U2AF1-207ENST00000468039 FOXI3A8MTJ6 420 aaPredicted RBP3.99□□□□□ -1.77
U2AF1-207ENST00000468039 C12orf77C9JDV5 145 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 C15orf65H3BRN8 121 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 H3BUX3 64 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 SLC31A2O15432 143 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 AIREO43918 545 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 RBP4P02753 201 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 CGB3P0DN86 165 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 CGB7P0DN87 165 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 FUT3P21217 361 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 CD24P25063 80 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 BLVRBP30043 206 aaPredicted RBP3.99□□□□□ -1.77
U2AF1-207ENST00000468039 FGF9P31371 208 aaPredicted RBP3.99□□□□□ -1.77
U2AF1-207ENST00000468039 KCNJ3P48549 501 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 RAB13P51153 203 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 SSTP61278 116 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 NCS1P62166 190 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 GNMTQ14749 295 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 FAM189A2Q15884 450 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 SSX2Q16385 188 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 ANKRD55Q3KP44 614 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 OLFML2AQ68BL7 652 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 SFXN4Q6P4A7 337 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 HEPN1Q6WQI6 88 aa3.99□□□□□ -1.77
U2AF1-207ENST00000468039 OR2W3Q7Z3T1 314 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms