RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TMEM88Q6PEY1 159 aa8.21□□□□□ -1.1
VPS26A-204ENST00000467852 ABHD14BQ96IU4 210 aa8.21□□□□□ -1.1
VPS26A-204ENST00000467852 SPIN2AQ99865 258 aa8.21□□□□□ -1.1
VPS26A-204ENST00000467852 NIPSNAP1Q9BPW8 284 aa8.21□□□□□ -1.1
VPS26A-204ENST00000467852 SPIN2BQ9BPZ2 258 aa8.21□□□□□ -1.1
VPS26A-204ENST00000467852 GORASP2Q9H8Y8 452 aa8.21□□□□□ -1.1
VPS26A-204ENST00000467852 SPACA1Q9HBV2 294 aa8.21□□□□□ -1.1
VPS26A-204ENST00000467852 DAZ1Q9NQZ3 744 aaKnown RBP8.21□□□□□ -1.1
VPS26A-204ENST00000467852 LRRC42Q9Y546 428 aa8.21□□□□□ -1.1
VPS26A-204ENST00000467852 IGHV3-35A0A0C4DH35 117 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 A0A0G2JND7 137 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 CCDC22O60826 627 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 GPX5O75715 221 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 GIG44P09565 113 aaPredicted RBP8.2□□□□□ -1.1
VPS26A-204ENST00000467852 CCL18P55774 89 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 VSNL1P62760 191 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 HAMPP81172 84 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 PTGES3Q15185 160 aaKnown RBP8.2□□□□□ -1.1
VPS26A-204ENST00000467852 OR5D14Q8NGL3 314 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 ACOT12Q8WYK0 555 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 MISP3Q96FF7 219 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 JAM3Q9BX67 310 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 METTL9Q9H1A3 318 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 SLC2A9Q9NRM0 540 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 ZNF257Q9Y2Q1 563 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 ETV7Q9Y603 341 aa8.2□□□□□ -1.1
VPS26A-204ENST00000467852 TRBV7-1A0A0A6YYK4 115 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 GABRPO00591 440 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 CA11O75493 328 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 SULT1C4O75897 302 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 ISG15P05161 165 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 SPP1P10451 314 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 RPA2P15927 270 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 ATP6V1B2P21281 511 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 CAPGP40121 348 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 MAGOHP61326 146 aaKnown RBP8.19□□□□□ -1.1
VPS26A-204ENST00000467852 FAM98BQ52LJ0 330 aaKnown RBP8.19□□□□□ -1.1
VPS26A-204ENST00000467852 LPCAT4Q643R3 524 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 PLET1Q6UQ28 207 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 SSX6Q7RTT6 188 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 GAPTQ8N292 157 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 ZNF383Q8NA42 475 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 HARBI1Q96MB7 349 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 TBX5Q99593 518 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 SRSF8Q9BRL6 282 aaKnown RBP8.19□□□□□ -1.1
VPS26A-204ENST00000467852 ZNF436Q9C0F3 470 aaPredicted RBP8.19□□□□□ -1.1
VPS26A-204ENST00000467852 SLC35D1Q9NTN3 355 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 ARL8BQ9NVJ2 186 aa8.19□□□□□ -1.1
VPS26A-204ENST00000467852 DPPA5A6NC42 116 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 ACTL6BO94805 426 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 CDRT1O95170 752 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 REG1AP05451 166 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 SERPINA2P20848 420 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 CDK5Q00535 292 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 CBX3Q13185 183 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 LEMD1Q68G75 181 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 IL1F10Q8WWZ1 152 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 TMEM190Q8WZ59 177 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 CMTM3Q96MX0 182 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 S100A13Q99584 98 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 NIPSNAP3BQ9BS92 247 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 Q9H8V8 135 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 H2AFY2Q9P0M6 372 aaPredicted RBP8.18□□□□□ -1.1
VPS26A-204ENST00000467852 ABRACLQ9P1F3 81 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 AASSQ9UDR5 926 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 GMPPBQ9Y5P6 360 aa8.18□□□□□ -1.1
VPS26A-204ENST00000467852 IGKV3-7A0A075B6H7 116 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 TEX48A0A1B0GUV7 120 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 DFFBO76075 338 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 EMP1P54849 157 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 PAFAH1B2P68402 229 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 PRSS8Q16651 343 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 FAM220AQ7Z4H9 259 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 BCDIN3DQ7Z5W3 292 aaKnown RBP8.17□□□□□ -1.1
VPS26A-204ENST00000467852 TEX45Q8NA69 505 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 OR10G2Q8NGC3 310 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 GIMAP1Q8WWP7 306 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 ANP32BQ92688 251 aaKnown RBP8.17□□□□□ -1.1
VPS26A-204ENST00000467852 NSL1Q96IY1 281 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 OR2A7Q96R45 310 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 FEVQ99581 238 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 SIKE1Q9BRV8 207 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 PAK1IP1Q9NWT1 392 aaPredicted RBP8.17□□□□□ -1.1
VPS26A-204ENST00000467852 TVP23BQ9NYZ1 205 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 IL36GQ9NZH8 169 aa8.17□□□□□ -1.1
VPS26A-204ENST00000467852 SAMHD1Q9Y3Z3 626 aaKnown RBP8.17□□□□□ -1.1
VPS26A-204ENST00000467852 KRTAP4-8A0A0G2JLE6 195 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 A0A1W2PPQ1 181 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 TMEM189A5PLL7 270 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 DYNC1I1O14576 645 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 DHFRP00374 187 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 GCSHP23434 173 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 GPR183P32249 361 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 DEFB131AP59861 70 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 ERVFC1-1P60608 527 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 VMA21Q3ZAQ7 101 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 RAB12Q6IQ22 244 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 SSX9Q7RTT3 188 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 GBGT1Q8N5D6 347 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms