RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 AP4M1O00189 453 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 RBFOX2O43251 390 aaKnown RBP eCLIP8.71□□□□□ -1.02
MSH5-212ENST00000467319 IGF1P05019 195 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 CRYGBP07316 175 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 VSIG10L2P0DP72 767 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 GNRHRP30968 328 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 CRIP2P52943 208 aaPredicted RBP8.71□□□□□ -1.02
MSH5-212ENST00000467319 TAS2R19P59542 299 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 SSBP2P81877 361 aaPredicted RBP8.71□□□□□ -1.02
MSH5-212ENST00000467319 C19orf54Q5BKX5 351 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.02
MSH5-212ENST00000467319 TCTEX1D4Q5JR98 221 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 C9orf152Q5JTZ5 239 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 OR4D10Q8NGI6 311 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 OR6F1Q8NGZ6 308 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 BORCS5Q969J3 196 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 FLYWCH2Q96CP2 140 aaKnown RBP8.71□□□□□ -1.02
MSH5-212ENST00000467319 HARBI1Q96MB7 349 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 GPHA2Q96T91 129 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 RASL11BQ9BPW5 248 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 FBXL15Q9H469 300 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 TAS2R8Q9NYW2 309 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 KIAA1456Q9P272 454 aa8.71□□□□□ -1.02
MSH5-212ENST00000467319 ANKRD20A5PA0PJZ0 165 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 A6NHS1 94 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 SRRM4A7MD48 611 aaKnown RBP8.7□□□□□ -1.02
MSH5-212ENST00000467319 ADARB2-AS1A8MUL3 147 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 SLC25A17O43808 307 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 CRYZL1O95825 349 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 CSF1P09603 554 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 ZNF735P0CB33 412 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 PTBP1P26599 531 aaKnown RBP eCLIP8.7□□□□□ -1.02
MSH5-212ENST00000467319 S100A5P33763 92 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 LGALS7P47929 136 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 UCP3P55916 312 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 CBX3Q13185 183 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 MRGPRG-AS1Q2M3A8 158 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 STEAP1BQ6NZ63 245 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 C10orf99Q6UWK7 81 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 FOXRED2Q8IWF2 684 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 STPG2Q8N412 459 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 OR6Q1Q8NGQ2 317 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 OR4S2Q8NH73 311 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 OSR1Q8TAX0 266 aaPredicted RBP8.7□□□□□ -1.02
MSH5-212ENST00000467319 CHPT1Q8WUD6 406 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 TCTEX1D2Q8WW35 142 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 MRGPRFQ96AM1 343 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 NOL4LQ96MY1 436 aaPredicted RBP8.7□□□□□ -1.02
MSH5-212ENST00000467319 OR51J1Q9H342 316 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 METTL1Q9UBP6 276 aaKnown RBP8.7□□□□□ -1.02
MSH5-212ENST00000467319 PRELID3BQ9Y3B1 194 aa8.7□□□□□ -1.02
MSH5-212ENST00000467319 PSMB11A5LHX3 300 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 ATP6V0E1O15342 81 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 TNFSF12O43508 249 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 FCGR3BO75015 233 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 PEX14O75381 377 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 FBXO24O75426 580 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 CD28P10747 220 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 KIR2DS2P43631 304 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 UBE2KP61086 200 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 RPS16P62249 146 aaKnown RBP8.69□□□□□ -1.02
MSH5-212ENST00000467319 MEF2DQ14814 521 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 OR2B11Q5JQS5 317 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 PRR31Q5SQ13 230 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 LIN54Q6MZP7 749 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 MFSD4AQ8N468 514 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 RNF152Q8N8N0 203 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 OR4C16Q8NGL9 310 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 RSRP1Q9BUV0 290 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 SLC2A8Q9NY64 477 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 FBXO7Q9Y3I1 522 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 WNK1Q9H4A3 2382 aa8.69□□□□□ -1.02
MSH5-212ENST00000467319 TET2Q6N021 2002 aaPredicted RBP8.68□□□□□ -1.02
MSH5-212ENST00000467319 GPR31O00270 319 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 FCN1O00602 326 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 SHOXO15266 292 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 RAMP3O60896 148 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 RAB3DO95716 219 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 CA2P00918 260 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 RLN1P04808 185 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 SAA1P0DJI8 122 aaPredicted RBP8.68□□□□□ -1.02
MSH5-212ENST00000467319 EGR2P11161 476 aaPredicted RBP8.68□□□□□ -1.02
MSH5-212ENST00000467319 TSPAN5P62079 268 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 CX3CL1P78423 397 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 CD83Q01151 205 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 CATR1Q13166 79 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 KLF9Q13886 244 aaPredicted RBP8.68□□□□□ -1.02
MSH5-212ENST00000467319 SPANXN2Q5MJ10 180 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 HIST2H2BDQ6DRA6 164 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 FAAP20Q6NZ36 180 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 PPP1R27Q86WC6 154 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 SLC38A6Q8IZM9 456 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 C11orf44Q8N8P7 122 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 OR5AU1Q8NGC0 362 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 SGMS2Q8NHU3 365 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 CITED2Q99967 270 aaPredicted RBP8.68□□□□□ -1.02
MSH5-212ENST00000467319 SRRQ9GZT4 340 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 PARP11Q9NR21 331 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 PLXNB1O43157 2135 aa8.68□□□□□ -1.02
MSH5-212ENST00000467319 ARPC1BO15143 372 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms