RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 FAM212BQ9NTI7 297 aaPredicted RBP12.76□□□□□ -0.37
GPC1-207ENST00000466624 LIN7CQ9NUP9 197 aaKnown RBP12.76□□□□□ -0.37
GPC1-207ENST00000466624 PLA2G10O15496 165 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 FCGR3BO75015 233 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 NDUFA3O95167 84 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 SPDEFO95238 335 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 RLN1P04808 185 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 F2RP25116 425 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 HNF4GQ14541 408 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 MMDQ15546 238 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 PHLDA2Q53GA4 152 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 C11orf88Q6PI97 169 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 POC5Q8NA72 575 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 OR4S2Q8NH73 311 aa12.75□□□□□ -0.37
GPC1-207ENST00000466624 TSNAXQ99598 290 aaKnown RBP12.75□□□□□ -0.37
GPC1-207ENST00000466624 C14orf166Q9Y224 244 aaKnown RBP12.75□□□□□ -0.37
GPC1-207ENST00000466624 NBR2O15453 112 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 LYRM1O43325 122 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 TSPAN9O75954 239 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 NDUFA7O95182 113 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 BTCP35070 178 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 PIGPP57054 158 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 RPS16P62249 146 aaKnown RBP12.74□□□□□ -0.37
GPC1-207ENST00000466624 SRSF2Q01130 221 aaKnown RBP12.74□□□□□ -0.37
GPC1-207ENST00000466624 RBMS2Q15434 407 aaKnown RBP12.74□□□□□ -0.37
GPC1-207ENST00000466624 TBC1D26Q86UD7 250 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 FAM71E2Q8N5Q1 922 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 Q8N9W7 124 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 OR51H1Q8NH63 302 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 RITA1Q96K30 269 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 GPHA2Q96T91 129 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 RTBDNQ9BSG5 229 aaPredicted RBP12.74□□□□□ -0.37
GPC1-207ENST00000466624 C5orf66Q9H5L9 145 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 KIAA1456Q9P272 454 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 COPZ2Q9P299 210 aa12.74□□□□□ -0.37
GPC1-207ENST00000466624 LINC00854A0A1B0GVQ3 168 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 NCBP2LA6PVI3 153 aaKnown RBP12.73□□□□□ -0.37
GPC1-207ENST00000466624 MPPED1O15442 326 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 CRYZL1O95825 349 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 AMY1AP04745 511 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 HKR1P10072 659 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 PI3P19957 117 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 F2RL1P55085 397 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 ASAH1Q13510 395 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 Q8N2B8 174 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 HARBI1Q96MB7 349 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 TSC22D3Q99576 134 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 VSIG4Q9Y279 399 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 ATRQ13535 2644 aa12.73□□□□□ -0.37
GPC1-207ENST00000466624 RRHO14718 337 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 SHOXO15266 292 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 NDUFB6O95139 128 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 HPRT1P00492 218 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 IGLV2-23P01705 113 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 CNTFRP26992 372 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 RELBQ01201 579 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 PSG5Q15238 335 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 C5orf64Q2M2E5 130 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 KRTAP24-1Q3LI83 254 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 OR2B11Q5JQS5 317 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 Q6ZSV7 163 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.72□□□□□ -0.37
GPC1-207ENST00000466624 TMEM158Q8WZ71 300 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 RBMXL1Q96E39 390 aaKnown RBP12.72□□□□□ -0.37
GPC1-207ENST00000466624 AIFM2Q9BRQ8 373 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 PRSS22Q9GZN4 317 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 C16orf95Q9H693 158 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 PLEKHA2Q9HB19 425 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 TBC1D24Q9ULP9 559 aa12.72□□□□□ -0.37
GPC1-207ENST00000466624 H0Y980 276 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 RAMP3O60896 148 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 HRASP01112 189 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 CCR6P51684 374 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 RAG2P55895 527 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 TAS2R31P59538 309 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 UBE2KP61086 200 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 IFITM3Q01628 133 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 KRTAP21-3Q3LHN1 58 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 OR4F5Q8NH21 305 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 RASL11BQ9BPW5 248 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 ZNF702PQ9H963 129 aa12.71□□□□□ -0.37
GPC1-207ENST00000466624 C3orf85A0A1B0GTC6 90 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 A0A1B0GUS0 222 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 TMEM89A2RUT3 159 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 CRYM-AS1A6NIL9 109 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 SRRM4A7MD48 611 aaKnown RBP12.7□□□□□ -0.38
GPC1-207ENST00000466624 HLA-DRB1P01911 266 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 CRYGBP07316 175 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 RPA2P15927 270 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 SLC6A1P30531 599 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 BLCAPP62952 87 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 POU2AF1Q16633 256 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 VMA21Q3ZAQ7 101 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms