RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 MAFIPQ8WZ33 124 aa8.34□□□□□ -1.07
PMF1-204ENST00000466489 SOX7Q9BT81 388 aa8.34□□□□□ -1.07
PMF1-204ENST00000466489 FAM96BQ9Y3D0 163 aa8.34□□□□□ -1.07
PMF1-204ENST00000466489 WIPI2Q9Y4P8 454 aa8.34□□□□□ -1.07
PMF1-204ENST00000466489 PPIAL4AQ9Y536 164 aa8.34□□□□□ -1.07
PMF1-204ENST00000466489 DOCK11Q5JSL3 2073 aa8.34□□□□□ -1.07
PMF1-204ENST00000466489 CR1P17927 2039 aa8.34□□□□□ -1.07
PMF1-204ENST00000466489 F8P00451 2351 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 TRAV38-1A0A0B4J264 116 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 VWC2LB2RUY7 222 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 SEC14L6B5MCN3 397 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 SH2D1BO14796 132 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 GATCO43716 136 aaKnown RBP8.33□□□□□ -1.08
PMF1-204ENST00000466489 FSTL3O95633 263 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 OPN1MWP04001 364 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 OPN1MW2P0DN77 364 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 OPN1MW3P0DN78 364 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 LMO1P25800 156 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 NPBWR1P48145 328 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 UBE2KP61086 200 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 ZNF154Q13106 437 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 TMEM155Q4W5P6 130 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 PHLDA2Q53GA4 152 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 AWAT1Q58HT5 328 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 NMSQ5H8A3 153 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 SELENOHQ8IZQ5 122 aaKnown RBP8.33□□□□□ -1.08
PMF1-204ENST00000466489 BOLLQ8N9W6 283 aaKnown RBP8.33□□□□□ -1.08
PMF1-204ENST00000466489 LRRC29Q8WV35 223 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 HPSE2Q8WWQ2 592 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 HIST1H2BAQ96A08 127 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 OR51M1Q9H341 326 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 KCNIP2Q9NS61 270 aa8.33□□□□□ -1.08
PMF1-204ENST00000466489 TEP1Q99973 2627 aaKnown RBP8.33□□□□□ -1.08
PMF1-204ENST00000466489 OTOGQ6ZRI0 2925 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 J3QT63 122 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 CDIPTO14735 213 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 AGPAT2O15120 278 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 SPRY1O43609 319 aaPredicted RBP8.32□□□□□ -1.08
PMF1-204ENST00000466489 ANGPTL7O43827 346 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 PGLYRP1O75594 196 aaPredicted RBP8.32□□□□□ -1.08
PMF1-204ENST00000466489 CYB5R3P00387 301 aaPredicted RBP8.32□□□□□ -1.08
PMF1-204ENST00000466489 SNRNP70P08621 437 aaKnown RBP8.32□□□□□ -1.08
PMF1-204ENST00000466489 RPL35P42766 123 aaKnown RBP8.32□□□□□ -1.08
PMF1-204ENST00000466489 HAAOP46952 286 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 HLA-DRB3P79483 266 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 CATR1Q13166 79 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 SMIM21Q3B7S5 101 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 SPRNQ5BIV9 151 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 KRBOX4Q5JUW0 171 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 CRIP3Q6Q6R5 217 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 ZNF429Q86V71 674 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 FAM58AQ8N1B3 248 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 SCCPDHQ8NBX0 429 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 OR5C1Q8NGR4 320 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 CLCC1Q96S66 551 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 TMUB1Q9BVT8 246 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 TOLLIPQ9H0E2 274 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 MAGT1Q9H0U3 335 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 SEBOXQ9HB31 216 aaPredicted RBP8.32□□□□□ -1.08
PMF1-204ENST00000466489 MIOXQ9UGB7 285 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
PMF1-204ENST00000466489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.31□□□□□ -1.083e-7■■■□□ 16.6
PMF1-204ENST00000466489 ABCA1O95477 2261 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 IGHV4-61A0A0C4DH41 118 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 OOEPA6NGQ2 149 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 NKX6-3A6NJ46 265 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 FAM90A9PA6NNJ1 464 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 TMEM250H0YL14 139 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 CLDN34H7C241 214 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 IGHV2-70P01814 119 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 ATP6V0CP27449 155 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 CFHR2P36980 270 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 GLIPR1P48060 266 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 ATP5IP56385 69 aaPredicted RBP8.31□□□□□ -1.08
PMF1-204ENST00000466489 TMEM249Q2WGJ8 235 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 SP6Q3SY56 376 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 LBHQ53QV2 105 aaPredicted RBP8.31□□□□□ -1.08
PMF1-204ENST00000466489 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 ZNF880Q6PDB4 577 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 WDR82Q6UXN9 313 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 CENPVQ7Z7K6 275 aaPredicted RBP8.31□□□□□ -1.08
PMF1-204ENST00000466489 WDR86Q86TI4 376 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 GAPTQ8N292 157 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 ZNF709Q8N972 641 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 OR8B3Q8NGG8 313 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 OR8B2Q96RD0 313 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 CABLES2Q9BTV7 478 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 GGACTQ9BVM4 153 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 SMIM3Q9BZL3 60 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 OR51I2Q9H344 312 aa8.31□□□□□ -1.08
PMF1-204ENST00000466489 RCL1Q9Y2P8 373 aaKnown RBP8.31□□□□□ -1.08
PMF1-204ENST00000466489 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
PMF1-204ENST00000466489 ACANP16112 2415 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 SMCO3A2RU48 225 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 SRRM5B3KS81 715 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 B4DSR2 109 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 H3BQ15 152 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms