RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 CCDC190Q86UF4 302 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 SLC38A6Q8IZM9 456 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 BCL6BQ8N143 479 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-204ENST00000466411 Q8N402 240 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 OR6Q1Q8NGQ2 317 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 VSTM2AQ8TAG5 236 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 ZFAND1Q8TCF1 268 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 SNAPC3Q92966 411 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 MOB3AQ96BX8 217 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 RBMXL1Q96E39 390 aaKnown RBP5.55□□□□□ -1.52
CLDN4-204ENST00000466411 ZNF48Q96MX3 618 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-204ENST00000466411 CLUHP3Q96NS8 147 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 RBM14Q96PK6 669 aaKnown RBP5.55□□□□□ -1.52
CLDN4-204ENST00000466411 DUX5Q96PT3 197 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 TSNAXQ99598 290 aaKnown RBP5.55□□□□□ -1.52
CLDN4-204ENST00000466411 C7orf50Q9BRJ6 194 aaKnown RBP5.55□□□□□ -1.52
CLDN4-204ENST00000466411 WDR12Q9GZL7 423 aaKnown RBP5.55□□□□□ -1.52
CLDN4-204ENST00000466411 BEX1Q9HBH7 125 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 LIN7CQ9NUP9 197 aaKnown RBP5.55□□□□□ -1.52
CLDN4-204ENST00000466411 OR1A1Q9P1Q5 309 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 KIAA1456Q9P272 454 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 WASHC3Q9Y3C0 194 aa5.55□□□□□ -1.52
CLDN4-204ENST00000466411 IGKV1-6A0A0C4DH72 117 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 NAP1L6A6NFF2 107 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 H7C2Y5 167 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 RBFOX2O43251 390 aaKnown RBP eCLIP5.54□□□□□ -1.52
CLDN4-204ENST00000466411 GPR137BO60478 399 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 PEX14O75381 377 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 ATG12O94817 140 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 RAB3DO95716 219 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 CD74P04233 296 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 FCER2P06734 321 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 FGF2P09038 288 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 OR8U9P0C7N5 309 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 ZNF134P52741 427 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 UCP3P55916 312 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 STEAP1BQ6NZ63 245 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 KCTD9Q7L273 389 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 TOMM5Q8N4H5 51 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 GVQW1Q8N7I0 195 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 CCDC71LQ8N9Z2 235 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 OR5AN1Q8NGI8 311 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 OR8U1Q8NH10 309 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 OR52I2Q8NH67 350 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 OR4S2Q8NH73 311 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 OR56B4Q8NH76 319 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 OR2T6Q8NHC8 308 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 OSR1Q8TAX0 266 aaPredicted RBP5.54□□□□□ -1.52
CLDN4-204ENST00000466411 UBALD1Q8TB05 177 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 MAFIPQ8WZ33 124 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 CFHR4Q92496 578 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 LEAP2Q969E1 77 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 ABHD14BQ96IU4 210 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 ABHD1Q96SE0 405 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 SOSTQ9BQB4 213 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 ZNF251Q9BRH9 671 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 SLC25A33Q9BSK2 321 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 CCDC32Q9BV29 185 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 CHIAQ9BZP6 476 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 PRSS22Q9GZN4 317 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 SLC2A8Q9NY64 477 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 CACFD1Q9UGQ2 172 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 ZNF580Q9UK33 172 aa5.54□□□□□ -1.52
CLDN4-204ENST00000466411 FRAS1Q86XX4 4008 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 ANKRD20A5PA0PJZ0 165 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 A6NDX4 124 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 M0R1X1 148 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 GPR31O00270 319 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 SLC31A2O15432 143 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 TSPAN9O75954 239 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 HRASP01112 189 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 IGKV1D-33P01593 117 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 IGKV1-33P01594 117 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 IGHV3-7P01780 117 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 SNRNP70P08621 437 aaKnown RBP5.53□□□□□ -1.52
CLDN4-204ENST00000466411 RPA2P15927 270 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 NFYAP23511 347 aaPredicted RBP5.53□□□□□ -1.52
CLDN4-204ENST00000466411 HLA-DMAP28067 261 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 CD40LGP29965 261 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 RAG2P55895 527 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 DLX1P56177 255 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 ABCA11PQ4W5N1 156 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 FOXRED2Q8IWF2 684 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 ODF3L1Q8IXM7 274 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 DRAM1Q8N682 238 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 TERB2Q8NHR7 220 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 SECTM1Q8WVN6 248 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 FLYWCH2Q96CP2 140 aaKnown RBP5.53□□□□□ -1.52
CLDN4-204ENST00000466411 RASL11BQ9BPW5 248 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 NABP2Q9BQ15 211 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 ZNF2Q9BSG1 426 aaPredicted RBP5.53□□□□□ -1.52
CLDN4-204ENST00000466411 THAP7Q9BT49 309 aaPredicted RBP5.53□□□□□ -1.52
CLDN4-204ENST00000466411 SLC5A7Q9GZV3 580 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 C16orf95Q9H693 158 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 SDHAF2Q9NX18 166 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 KLK11Q9UBX7 282 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 ELF5Q9UKW6 265 aaPredicted RBP5.53□□□□□ -1.52
CLDN4-204ENST00000466411 V9GYH0 126 aa5.53□□□□□ -1.52
CLDN4-204ENST00000466411 IGKV1D-8A0A087WSZ0 117 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 LCE6AA0A183 80 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms