RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 APOA2P02652 100 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 SNRNP70P08621 437 aaKnown RBP8.92□□□□□ -0.98
VCP-204ENST00000466100 AKR1C4P17516 323 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 CD24P25063 80 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 UCP1P25874 307 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 S100GP29377 79 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 BRS3P32247 399 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 MC5RP33032 325 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 KIR2DS2P43631 304 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 ARHGDIBP52566 201 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 SCGB2A2Q13296 93 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 TMEM177Q53S58 311 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 OR2B11Q5JQS5 317 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 DHRS7BQ6IAN0 325 aaPredicted RBP8.92□□□□□ -0.98
VCP-204ENST00000466100 PLET1Q6UQ28 207 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 CCBE1Q6UXH8 406 aaPredicted RBP8.92□□□□□ -0.98
VCP-204ENST00000466100 SPAG16Q8N0X2 631 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 TCTEX1D1Q8N7M0 179 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 GLYATL2Q8WU03 294 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 CHPT1Q8WUD6 406 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 EAF1Q96JC9 268 aaPredicted RBP8.92□□□□□ -0.98
VCP-204ENST00000466100 RITA1Q96K30 269 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 TCF19Q9Y242 345 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 PRELID3BQ9Y3B1 194 aa8.92□□□□□ -0.98
VCP-204ENST00000466100 TET2Q6N021 2002 aaPredicted RBP8.92□□□□□ -0.98
VCP-204ENST00000466100 A0A0B4J293 547 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 TEX13DA0A0J9YY54 714 aaPredicted RBP8.91□□□□□ -0.98
VCP-204ENST00000466100 C3orf85A0A1B0GTC6 90 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 B3GALNT1O75752 331 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 CRYZL1O95825 349 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 IGKV1-39P01597 117 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 IGKV1D-39P04432 117 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 OR5AC1P0C628 307 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 OR4E1P0C645 316 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 RRASP10301 218 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 DHRS2Q13268 280 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 TMEM187Q14656 261 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 RTL8BQ17RB0 113 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 SP6Q3SY56 376 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 SGPP2Q8IWX5 399 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 TMEM86BQ8N661 226 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 OR4S2Q8NH73 311 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 LHFPL5Q8TAF8 219 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 CD300LFQ8TDQ1 290 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 SSMEM1Q8WWF3 244 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 TMEM222Q9H0R3 208 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 BEX1Q9HBH7 125 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 ESM1Q9NQ30 184 aa8.91□□□□□ -0.98
VCP-204ENST00000466100 C9orf170A2RU37 121 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 DNAJC9-AS1A6NH13 148 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 SRRM4A7MD48 611 aaKnown RBP8.9□□□□□ -0.98
VCP-204ENST00000466100 INMT-MINDY4F8WBC2 141 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 H7C2Y5 167 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 HOXA3O43365 443 aaPredicted RBP8.9□□□□□ -0.98
VCP-204ENST00000466100 S1PR2O95136 353 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 SFT2D2O95562 160 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 CDS2O95674 445 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 MOSP00540 346 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 IGLV2-23P01705 113 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 IL5P05113 134 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 FAM106CPP0CH98 169 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 CNTFRP26992 372 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 RAB25P57735 213 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 POU2AF1Q16633 256 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 LYG2Q86SG7 212 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 MINDY2Q8NBR6 621 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 OR4C13Q8NGP0 309 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 OR2T10Q8NGZ9 312 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 OR5R1Q8NH85 324 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 OSR1Q8TAX0 266 aaPredicted RBP8.9□□□□□ -0.98
VCP-204ENST00000466100 ZDHHC16Q969W1 377 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 TMEM56Q96MV1 263 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 RNF5Q99942 180 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 PLEKHA2Q9HB19 425 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 PLSCR3Q9NRY6 295 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 COMMD9Q9P000 198 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 VPREB3Q9UKI3 123 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 POMT1Q9Y6A1 747 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 TMEM56-RWDD3S4R434 201 aa8.9□□□□□ -0.98
VCP-204ENST00000466100 TENM1Q9UKZ4 2725 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 CLDN34H7C241 214 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 CHST1O43916 411 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 NDUFA3O95167 84 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 HPRT1P00492 218 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 IFNA2P01563 188 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 HLA-AP01891 365 aaKnown RBP8.89□□□□□ -0.99
VCP-204ENST00000466100 P0C879 139 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 TMEM11P17152 192 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 LPAR6P43657 344 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 F2RL1P55085 397 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 HILS1P60008 231 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 HNF4GQ14541 408 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 SLC9A3R2Q15599 337 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 ANKRD55Q3KP44 614 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 LIAT1Q6ZQX7 453 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 TMEM219Q86XT9 240 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 NPBQ8NG41 125 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 OR52B4Q8NGK2 314 aa8.89□□□□□ -0.99
VCP-204ENST00000466100 FLYWCH2Q96CP2 140 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms