RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 S1PR2O95136 353 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 DUS4LO95620 317 aaKnown RBP13.86□□□□□ -0.19
PTPRU-206ENST00000465525 CRYZL1O95825 349 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 IGKV1-16P04430 117 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 SERPINE2P07093 398 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 ANXA3P12429 323 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 UCP1P25874 307 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 RAB13P51153 203 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 FBLN7Q53RD9 439 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 C11orf88Q6PI97 169 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 LIAT1Q6ZQX7 453 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 C12orf45Q8N5I9 185 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-206ENST00000465525 OR5AN1Q8NGI8 311 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 HIVEP2P31629 2446 aa13.86□□□□□ -0.19
PTPRU-206ENST00000465525 SNRPGP15A8MWD9 76 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 IGKV1-39P01597 117 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 APOA2P02652 100 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 IGKV1D-39P04432 117 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 SRP14P37108 136 aaKnown RBP13.85□□□□□ -0.19
PTPRU-206ENST00000465525 C2orf68Q2NKX9 166 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 TMEM268Q5VZI3 342 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 MITD1Q8WV92 249 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 CFHR4Q92496 578 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 MS4A7Q9GZW8 240 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-206ENST00000465525 CDC42EP3Q9UKI2 254 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 FAM96BQ9Y3D0 163 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 SONP18583 2426 aaKnown RBP13.85□□□□□ -0.19
PTPRU-206ENST00000465525 TXNL1O43396 289 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 RTL8BQ17RB0 113 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 SELENOHQ8IZQ5 122 aaKnown RBP13.85□□□□□ -0.19
PTPRU-206ENST00000465525 OR8H3Q8N146 312 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 RITA1Q96K30 269 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 PHB2Q99623 299 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 WASHC3Q9Y3C0 194 aa13.85□□□□□ -0.19
PTPRU-206ENST00000465525 BOLA2-SMG1P6H3BVE0 249 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 CCSO14618 274 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 ADAP1O75689 374 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 HOXB5P09067 269 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 LYZL2Q7Z4W2 148 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 AKAP14Q86UN6 197 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 ZNF695Q8IW36 515 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 VKORC1L1Q8N0U8 176 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 SLC35G3Q8N808 338 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 OR4S2Q8NH73 311 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 COQ8AQ8NI60 647 aa13.84□□□□□ -0.19
PTPRU-206ENST00000465525 OOSP1A8MZH6 123 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 VENTXO95231 258 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 CDS2O95674 445 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 SNRNP70P08621 437 aaKnown RBP13.83□□□□□ -0.2
PTPRU-206ENST00000465525 G6PCP35575 357 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 KIR2DS2P43631 304 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 HNF4GQ14541 408 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 IZUMO4Q1ZYL8 232 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 DEFB112Q30KQ8 113 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 CCDC144NLQ6NUI1 221 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 C9orf139Q6ZV77 190 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 SSX9Q7RTT3 188 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 LGI3Q8N145 548 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 MED28Q9H204 178 aa13.83□□□□□ -0.2
PTPRU-206ENST00000465525 INAFM1C9JVW0 142 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 SIX6O95475 246 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 KRASP01116 189 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 IGKV1D-33P01593 117 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 IGKV1-33P01594 117 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 HES1Q14469 280 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 FCN2Q15485 313 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 TMEM56Q96MV1 263 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 TMEM56-RWDD3S4R434 201 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 GOSR2O14653 212 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 B3GALNT1O75752 331 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 IGKV1-5P01602 117 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 FBP1P09467 338 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 CNTFRP26992 372 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 MC5RP33032 325 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 RPS16P62249 146 aaKnown RBP13.82□□□□□ -0.2
PTPRU-206ENST00000465525 SCGB2A2Q13296 93 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 PDPNQ86YL7 162 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 TCTEX1D1Q8N7M0 179 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 CD300LFQ8TDQ1 290 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 RBPMSQ93062 196 aaKnown RBP13.82□□□□□ -0.2
PTPRU-206ENST00000465525 R3HDM4Q96D70 268 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 MGAT4CQ9UBM8 478 aa13.82□□□□□ -0.2
PTPRU-206ENST00000465525 MXRA5Q9NR99 2828 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 A0A0G2JRQ6 117 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 SRRM4A7MD48 611 aaKnown RBP13.81□□□□□ -0.2
PTPRU-206ENST00000465525 MPTX1A8MV57 137 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 FAM25EA8MYX2 175 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 SHOXO15266 292 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 RBFOX2O43251 390 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTPRU-206ENST00000465525 HPRT1P00492 218 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 TRAPPC2P0DI81 140 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 TRAPPC2BP0DI82 140 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 RRASP10301 218 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 RRAS2P62070 204 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-206ENST00000465525 SRPXP78539 464 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 HABP2Q14520 560 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-206ENST00000465525 RNASE11Q8TAA1 199 aaKnown RBP13.81□□□□□ -0.2
PTPRU-206ENST00000465525 FLYWCH2Q96CP2 140 aaKnown RBP13.81□□□□□ -0.2
PTPRU-206ENST00000465525 HARBI1Q96MB7 349 aa13.81□□□□□ -0.2
PTPRU-206ENST00000465525 A0A0B4J2A0 478 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms