RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 PPP1R35Q8TAP8 253 aa15.26■□□□□ 0.03
SYNE4-204ENST00000465425 QTRT1Q9BXR0 403 aaKnown RBP15.26■□□□□ 0.03
SYNE4-204ENST00000465425 PRR14LQ5THK1 2151 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 KBTBD11O94819 623 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 DUTP33316 252 aaKnown RBP15.25■□□□□ 0.03
SYNE4-204ENST00000465425 GNB2P62879 340 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 STARD4Q96DR4 205 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 ASCL3Q9NQ33 180 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 CACNA1GO43497 2377 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 SPENQ96T58 3664 aaKnown RBP15.25■□□□□ 0.03
SYNE4-204ENST00000465425 SPAARA0A1B0GVQ0 90 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 SRRM5B3KS81 715 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 PPP1R2P9O14990 202 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 WT1P19544 449 aaPredicted RBP15.25■□□□□ 0.03
SYNE4-204ENST00000465425 VWC2Q2TAL6 325 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 SPNS3Q6ZMD2 512 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 PIP4P1Q86T03 277 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 OR4F5Q8NH21 305 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 RAB24Q969Q5 203 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 OR4F4Q96R69 305 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 GGACTQ9BVM4 153 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 JPT1Q9UK76 154 aa15.25■□□□□ 0.03
SYNE4-204ENST00000465425 DSPP15924 2871 aaKnown RBP15.24■□□□□ 0.03
SYNE4-204ENST00000465425 DOCK11Q5JSL3 2073 aa15.24■□□□□ 0.03
SYNE4-204ENST00000465425 LINC00587B1AMM8 73 aa15.24■□□□□ 0.03
SYNE4-204ENST00000465425 HPRT1P00492 218 aa15.24■□□□□ 0.03
SYNE4-204ENST00000465425 EGR1P18146 543 aa15.24■□□□□ 0.03
SYNE4-204ENST00000465425 DEFB109BQ30KR1 87 aa15.24■□□□□ 0.03
SYNE4-204ENST00000465425 PRAMEF5Q5TYX0 476 aa15.24■□□□□ 0.03
SYNE4-204ENST00000465425 SSX9Q7RTT3 188 aa15.24■□□□□ 0.03
SYNE4-204ENST00000465425 SSX3Q99909 188 aa15.24■□□□□ 0.03
SYNE4-204ENST00000465425 TRBV24-1A0A075B6N3 115 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 IGKV1D-17A0A075B6S4 117 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 SEC14L6B5MCN3 397 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 MGST3O14880 152 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 PLA2G5P39877 138 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 BSXQ3C1V8 233 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 ACOT6Q3I5F7 207 aaPredicted RBP15.23■□□□□ 0.03
SYNE4-204ENST00000465425 MORN2Q502X0 79 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 OR4A16Q8NH70 328 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 FAM234AQ9H0X4 552 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 PARLQ9H300 379 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 DKK4Q9UBT3 224 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 A0A1B0GWJ7 208 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 OR9G9P0C7N8 305 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 TRGC1P0CF51 173 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 EDDM3BP56851 147 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 RPP30P78346 268 aaKnown RBP15.23■□□□□ 0.03
SYNE4-204ENST00000465425 SNX22Q96L94 193 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 SLC25A15Q9Y619 301 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 CFAP47Q6ZTR5 3102 aa15.23■□□□□ 0.03
SYNE4-204ENST00000465425 IFITM10A6NMD0 228 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 C15orf62A8K5M9 175 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 M0R1X1 148 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 LY86O95711 162 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 CGAP01215 116 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 IFNA10P01566 189 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 CD1BP29016 333 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 CDC34P49427 236 aaPredicted RBP15.22■□□□□ 0.03
SYNE4-204ENST00000465425 ERVK-16P61578 105 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 FAM90A1Q86YD7 464 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 FRZBQ92765 325 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 OR6C3Q9NZP0 311 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 ZNF83P51522 516 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 C4orf17Q53FE4 359 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 C16orf82Q7Z2V1 217 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 LRP11Q86VZ4 500 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 FAM169BQ8N8A8 192 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 GATAD1Q8WUU5 269 aa15.22■□□□□ 0.03
SYNE4-204ENST00000465425 IGHV3OR15-7A0A075B7D8 119 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 ELOA3CA0A087WX78 387 aaPredicted RBP15.21■□□□□ 0.03
SYNE4-204ENST00000465425 SMCO3A2RU48 225 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 FAM90A9PA6NNJ1 464 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 YPEL1O60688 119 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 PAGE4O60829 102 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 GCSAMQ8N6F7 178 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 ABHD5Q8WTS1 349 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 FAM216AQ8WUB2 273 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 YPEL2Q96QA6 119 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 OR2V2Q96R30 315 aa15.21■□□□□ 0.03
SYNE4-204ENST00000465425 INTS1Q8N201 2190 aaKnown RBP15.21■□□□□ 0.03
SYNE4-204ENST00000465425 M0R1B8 84 aa15.21■□□□□ 0.02
SYNE4-204ENST00000465425 PROP1O75360 226 aa15.21■□□□□ 0.02
SYNE4-204ENST00000465425 IGHV3-13P01766 116 aa15.21■□□□□ 0.02
SYNE4-204ENST00000465425 IGHV3-7P01780 117 aa15.21■□□□□ 0.02
SYNE4-204ENST00000465425 SPCS3P61009 180 aa15.21■□□□□ 0.02
SYNE4-204ENST00000465425 RPL23P62829 140 aaKnown RBP15.21■□□□□ 0.02
SYNE4-204ENST00000465425 PDZD11Q5EBL8 140 aa15.21■□□□□ 0.02
SYNE4-204ENST00000465425 ZNRF1Q8ND25 227 aa15.21■□□□□ 0.02
SYNE4-204ENST00000465425 OR5B12Q96R08 314 aa15.21■□□□□ 0.02
SYNE4-204ENST00000465425 HEATR1Q9H583 2144 aaKnown RBP15.2■□□□□ 0.02
SYNE4-204ENST00000465425 ZFHX4Q86UP3 3567 aa15.2■□□□□ 0.02
SYNE4-204ENST00000465425 DEFA4P12838 97 aa15.2■□□□□ 0.02
SYNE4-204ENST00000465425 MDKP21741 143 aaPredicted RBP15.2■□□□□ 0.02
SYNE4-204ENST00000465425 RPL39P5Q59GN2 51 aa15.2■□□□□ 0.02
SYNE4-204ENST00000465425 NECAP1Q8NC96 275 aa15.2■□□□□ 0.02
SYNE4-204ENST00000465425 OR10A7Q8NGE5 316 aa15.2■□□□□ 0.02
SYNE4-204ENST00000465425 S1PR3Q99500 378 aa15.2■□□□□ 0.02
SYNE4-204ENST00000465425 HEYLQ9NQ87 328 aaPredicted RBP15.2■□□□□ 0.02
SYNE4-204ENST00000465425 MBD3L4A6NDZ8 208 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms