RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
MMP11-206ENST00000465385 PARD6AQ9NPB6 346 aa11.4□□□□□ -0.58
MMP11-206ENST00000465385 GNG12Q9UBI6 72 aa11.4□□□□□ -0.58
MMP11-206ENST00000465385 POLDIP2Q9Y2S7 368 aa11.4□□□□□ -0.58
MMP11-206ENST00000465385 NCKAP5O14513 1909 aa11.4□□□□□ -0.58
MMP11-206ENST00000465385 B4E171 279 aa11.4□□□□□ -0.59
MMP11-206ENST00000465385 HAND1O96004 215 aa11.4□□□□□ -0.59
MMP11-206ENST00000465385 TSPAN7P41732 249 aa11.4□□□□□ -0.59
MMP11-206ENST00000465385 C21orf62-AS1Q17RA5 79 aa11.4□□□□□ -0.59
MMP11-206ENST00000465385 CMTM2Q8TAZ6 248 aa11.4□□□□□ -0.59
MMP11-206ENST00000465385 K7ESF4 209 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 M0R143 59 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 SLC17A3O00476 420 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 ACTL6BO94805 426 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 HBZP02008 142 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 OR1C1Q15619 314 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 ZNF114Q8NC26 417 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 SNHG12Q9BXW3 62 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 NAGKQ9UJ70 344 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 C12orf77C9JDV5 145 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 PSPNO60542 156 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 COL8A2P25067 703 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 SPCS3P61009 180 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 TBC1D28Q2M2D7 210 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 C2orf88Q9BSF0 95 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 KRTAP27-1Q3LI81 207 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 TMEM14EPQ6UXP3 125 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 MOB1BQ7L9L4 216 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 TGIF2LYQ8IUE0 185 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 VN1R17PQ8TDU5 208 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 GCM1Q9NP62 436 aa11.39□□□□□ -0.59
MMP11-206ENST00000465385 GFRA1P56159 465 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 LOXL2Q9Y4K0 774 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 RIF1Q5UIP0 2472 aaKnown RBP11.38□□□□□ -0.59
MMP11-206ENST00000465385 TMEM30CPA0ZSE6 113 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 NUPR1O60356 82 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 FABP6P51161 128 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 GNB1P62873 340 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 CISD2Q8N5K1 135 aaKnown RBP11.38□□□□□ -0.59
MMP11-206ENST00000465385 CNEP1R1Q8N9A8 125 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 QTRT1Q9BXR0 403 aaKnown RBP11.38□□□□□ -0.59
MMP11-206ENST00000465385 TP53TG5Q9Y2B4 290 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 NPPCP23582 126 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 TCL1AP56279 114 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 KRTDAPP60985 99 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
MMP11-206ENST00000465385 ACTL10Q5JWF8 245 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 Q6P435 159 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 C6orf15Q6UXA7 325 aaPredicted RBP11.38□□□□□ -0.59
MMP11-206ENST00000465385 OR4A16Q8NH70 328 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 SLC25A40Q8TBP6 338 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
MMP11-206ENST00000465385 FAM173AQ9BQD7 235 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 IER2Q9BTL4 223 aa11.38□□□□□ -0.59
MMP11-206ENST00000465385 SCO2A0A1W2PP80 73 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 IL18BPO95998 194 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 LHX2P50458 406 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 ZNF497Q6ZNH5 498 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 TIPARPQ7Z3E1 657 aaKnown RBP11.37□□□□□ -0.59
MMP11-206ENST00000465385 WDR86Q86TI4 376 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 LINC01551Q86U37 167 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 ZNF645Q8N7E2 425 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 Q8NFD4 153 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 TTTY12Q9BZ98 90 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 ABI3Q9P2A4 366 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 DSPP15924 2871 aaKnown RBP11.37□□□□□ -0.59
MMP11-206ENST00000465385 MKRN2OSH3BPM6 223 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 CD1BP29016 333 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 CCKARP32238 428 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 ADMP35318 185 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 MRPL49Q13405 166 aaKnown RBP11.37□□□□□ -0.59
MMP11-206ENST00000465385 SP5Q6BEB4 398 aaPredicted RBP11.37□□□□□ -0.59
MMP11-206ENST00000465385 TMEM251Q8N6I4 163 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 MRPL37Q9BZE1 423 aaKnown RBP11.37□□□□□ -0.59
MMP11-206ENST00000465385 DUSP3P51452 185 aaPredicted RBP11.37□□□□□ -0.59
MMP11-206ENST00000465385 LINC00596Q86U02 117 aa11.37□□□□□ -0.59
MMP11-206ENST00000465385 HEATR1Q9H583 2144 aaKnown RBP11.37□□□□□ -0.59
MMP11-206ENST00000465385 MARCH11A6NNE9 402 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 IER3P46695 156 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 CLDN18P56856 261 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 SRSF7Q16629 238 aaKnown RBP eCLIP11.36□□□□□ -0.59
MMP11-206ENST00000465385 KIAA1644Q3SXP7 199 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 GBGT1Q8N5D6 347 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 ZNF703Q9H7S9 590 aaPredicted RBP11.36□□□□□ -0.59
MMP11-206ENST00000465385 TUBG2Q9NRH3 451 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 SERTAD4Q9NUC0 356 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 AQP7O14520 342 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 SRP14P37108 136 aaKnown RBP11.36□□□□□ -0.59
MMP11-206ENST00000465385 ABHD12Q8N2K0 398 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 R3HDM4Q96D70 268 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 POLR3KQ9Y2Y1 108 aaPredicted RBP11.36□□□□□ -0.59
MMP11-206ENST00000465385 M0R1X1 148 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 FCN1O00602 326 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 AGFG2O95081 481 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 GPR12P47775 334 aa11.36□□□□□ -0.59
MMP11-206ENST00000465385 HTD2P86397 168 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms