RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 RRHO14718 337 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 KCNAB3O43448 404 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 IGHG2P01859 326 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 FAUP35544 74 aaKnown RBP13.45□□□□□ -0.26
USP39-211ENST00000465282 VDAC2P45880 294 aaPredicted RBP13.45□□□□□ -0.26
USP39-211ENST00000465282 RPS16P62249 146 aaKnown RBP13.45□□□□□ -0.26
USP39-211ENST00000465282 C5orf64Q2M2E5 130 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 AADACL3Q5VUY0 350 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 ZNF818PQ6ZRF7 136 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 SLC38A6Q8IZM9 456 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 TCTEX1D1Q8N7M0 179 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 TERB2Q8NHR7 220 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 CD300LFQ8TDQ1 290 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 ZNF486Q96H40 463 aaPredicted RBP13.45□□□□□ -0.26
USP39-211ENST00000465282 RITA1Q96K30 269 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 FXYD6Q9H0Q3 95 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 SERTAD4Q9NUC0 356 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 PTTG2Q9NZH5 202 aa13.45□□□□□ -0.26
USP39-211ENST00000465282 SHOXO15266 292 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 RBFOX2O43251 390 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP39-211ENST00000465282 PEX14O75381 377 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 HLA-DRB1P01911 266 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 LIN54Q6MZP7 749 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 Q6ZS46 218 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 OR4D10Q8NGI6 311 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 OR4S2Q8NH73 311 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 TCTEX1D2Q8WW35 142 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 WFDC12Q8WWY7 111 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 TRIM63Q969Q1 353 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 PRRT1Q99946 306 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 AIFM2Q9BRQ8 373 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 RSRP1Q9BUV0 290 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 SRRQ9GZT4 340 aa13.44□□□□□ -0.26
USP39-211ENST00000465282 FCGR3BO75015 233 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 CRYZL1O95825 349 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 ZNF735P0CB33 412 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 RPL30P62888 115 aaKnown RBP13.43□□□□□ -0.26
USP39-211ENST00000465282 PSG5Q15238 335 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 C9orf152Q5JTZ5 239 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 SLC35E3Q7Z769 313 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 FOXRED2Q8IWF2 684 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 TOMM5Q8N4H5 51 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 POC5Q8NA72 575 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 OR4C16Q8NGL9 310 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 ZFAND1Q8TCF1 268 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 HARBI1Q96MB7 349 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 WNT10AQ9GZT5 417 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 SLC2A8Q9NY64 477 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 SCP2D1Q9UJQ7 156 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 ZNF580Q9UK33 172 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 SIGLEC9Q9Y336 463 aa13.43□□□□□ -0.26
USP39-211ENST00000465282 PGLYRP1O75594 196 aaPredicted RBP13.42□□□□□ -0.26
USP39-211ENST00000465282 CNTFRP26992 372 aa13.42□□□□□ -0.26
USP39-211ENST00000465282 PLGLAQ15195 96 aa13.42□□□□□ -0.26
USP39-211ENST00000465282 SURF2Q15527 256 aaPredicted RBP13.42□□□□□ -0.26
USP39-211ENST00000465282 SHISA2Q6UWI4 295 aa13.42□□□□□ -0.26
USP39-211ENST00000465282 S100ZQ8WXG8 99 aa13.42□□□□□ -0.26
USP39-211ENST00000465282 GON7Q9BXV9 100 aa13.42□□□□□ -0.26
USP39-211ENST00000465282 FAM212BQ9NTI7 297 aaPredicted RBP13.42□□□□□ -0.26
USP39-211ENST00000465282 METTL1Q9UBP6 276 aaKnown RBP13.42□□□□□ -0.26
USP39-211ENST00000465282 HAX1O00165 279 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 AP4M1O00189 453 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 TNFSF12O43508 249 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 HRASP01112 189 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 KLF9Q13886 244 aaPredicted RBP13.41□□□□□ -0.26
USP39-211ENST00000465282 VMA21Q3ZAQ7 101 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 SCGB2B2Q4G0G5 96 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 TEX45Q8NA69 505 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 CHPT1Q8WUD6 406 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 SCGB3A2Q96PL1 93 aa13.41□□□□□ -0.26
USP39-211ENST00000465282 SH2D7A6NKC9 451 aaPredicted RBP13.4□□□□□ -0.26
USP39-211ENST00000465282 IGLV2-23P01705 113 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 IGF1P05019 195 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 PGAM2P15259 253 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 F2RP25116 425 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 UBE2KP61086 200 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 RND3P61587 244 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 ZNF562Q6V9R5 426 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 CENPVQ7Z7K6 275 aaPredicted RBP13.4□□□□□ -0.26
USP39-211ENST00000465282 PPP1R27Q86WC6 154 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 SPAG16Q8N0X2 631 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 KLHDC1Q8N7A1 406 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 VSTM2AQ8TAG5 236 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 FBXL15Q9H469 300 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 PLEKHA2Q9HB19 425 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 SLC2A9Q9NRM0 540 aa13.4□□□□□ -0.26
USP39-211ENST00000465282 SLC25A17O43808 307 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 CREBL2O60519 120 aaPredicted RBP13.39□□□□□ -0.27
USP39-211ENST00000465282 HPRT1P00492 218 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 RLN1P04808 185 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 CRYGBP07316 175 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 VSIG10L2P0DP72 767 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 INPP1P49441 399 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 BRWD1-AS2P59051 145 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 TRIQKQ629K1 86 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 CCDC71LQ8N9Z2 235 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 OR51H1Q8NH63 302 aa13.39□□□□□ -0.27
USP39-211ENST00000465282 WIPF2Q8TF74 440 aaPredicted RBP13.39□□□□□ -0.27
USP39-211ENST00000465282 RBMXL1Q96E39 390 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms