RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 ZNF107Q9UII5 783 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-205ENST00000465238 M0QYG6 137 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 NBR2O15453 112 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 GSTZ1O43708 216 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-205ENST00000465238 CD3DP04234 171 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 RRASP10301 218 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 TMEM95Q3KNT9 176 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 PYDC2Q56P42 97 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 SPANXN2Q5MJ10 180 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 VAX1Q5SQQ9 334 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 ZNF660Q6AZW8 331 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-205ENST00000465238 CCDC190Q86UF4 302 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 Q8N9W7 124 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 BVESQ8NE79 360 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 OR6Q1Q8NGQ2 317 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 MOB3AQ96BX8 217 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 FLYWCH2Q96CP2 140 aaKnown RBP14.01□□□□□ -0.17
COL7A1-205ENST00000465238 HSD17B10Q99714 261 aaKnown RBP14.01□□□□□ -0.17
COL7A1-205ENST00000465238 LIN7CQ9NUP9 197 aaKnown RBP14.01□□□□□ -0.17
COL7A1-205ENST00000465238 TAS2R8Q9NYW2 309 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 PRELID3BQ9Y3B1 194 aa14.01□□□□□ -0.17
COL7A1-205ENST00000465238 DNAH3Q8TD57 4116 aa14□□□□□ -0.17
COL7A1-205ENST00000465238 IGLV2-14P01704 120 aa14□□□□□ -0.17
COL7A1-205ENST00000465238 PTBP1P26599 531 aaKnown RBP eCLIP14□□□□□ -0.17
COL7A1-205ENST00000465238 CD83Q01151 205 aa14□□□□□ -0.17
COL7A1-205ENST00000465238 KCTD9Q7L273 389 aa14□□□□□ -0.17
COL7A1-205ENST00000465238 NPBQ8NG41 125 aa14□□□□□ -0.17
COL7A1-205ENST00000465238 OR5AU1Q8NGC0 362 aa14□□□□□ -0.17
COL7A1-205ENST00000465238 TSNAXQ99598 290 aaKnown RBP14□□□□□ -0.17
COL7A1-205ENST00000465238 TINAGL1Q9GZM7 467 aaPredicted RBP14□□□□□ -0.17
COL7A1-205ENST00000465238 BATF3Q9NR55 127 aa14□□□□□ -0.17
COL7A1-205ENST00000465238 LINC00473A8K010 186 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 RAB3DO95716 219 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 IGKV1-16P04430 117 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 CNTFRP26992 372 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 STEAP1BQ6NZ63 245 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 LPCAT3Q6P1A2 487 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 ZNF66Q6ZN08 573 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 MFSD4AQ8N468 514 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 ARRDC1Q8N5I2 433 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 FAM71E2Q8N5Q1 922 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 MRAPQ8TCY5 172 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 TCTEX1D2Q8WW35 142 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 THAP7Q9BT49 309 aaPredicted RBP13.99□□□□□ -0.17
COL7A1-205ENST00000465238 V9GYH0 126 aa13.99□□□□□ -0.17
COL7A1-205ENST00000465238 TNFSF12O43508 249 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 CD74P04233 296 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 ETV6P41212 452 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 LGALS7P47929 136 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 MEF2DQ14814 521 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 PLGLAQ15195 96 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 C5orf64Q2M2E5 130 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 ZNF818PQ6ZRF7 136 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 SLC35E3Q7Z769 313 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 CENPVQ7Z7K6 275 aaPredicted RBP13.98□□□□□ -0.17
COL7A1-205ENST00000465238 WFDC9Q8NEX5 89 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 DDB2Q92466 427 aa13.98□□□□□ -0.17
COL7A1-205ENST00000465238 RRHO14718 337 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 SHOXO15266 292 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 FCGR3BO75015 233 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 NDUFA3O95167 84 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 IGHG2P01859 326 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 AKAIN1P0CW23 69 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 PF4V1P10720 104 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 CD33P20138 364 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 GNRHRP30968 328 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 RPL30P62888 115 aaKnown RBP13.97□□□□□ -0.17
COL7A1-205ENST00000465238 CATR1Q13166 79 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 EIF4EBP1Q13541 118 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-205ENST00000465238 PSG5Q15238 335 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 TMEM177Q53S58 311 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 OR2B11Q5JQS5 317 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 LIN54Q6MZP7 749 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 CMTM1Q8IZ96 169 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 Q8N402 240 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 FXYD6Q9H0Q3 95 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 FBXL15Q9H469 300 aa13.97□□□□□ -0.17
COL7A1-205ENST00000465238 A0A1W2PRX2 142 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 DISC1C4P0D8 188 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 GPR31O00270 319 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 SPDEFO95238 335 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 CRYZL1O95825 349 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 S100GP29377 79 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 CNPY1Q3B7I2 92 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 FOXRED2Q8IWF2 684 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 OR4D10Q8NGI6 311 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 HARBI1Q96MB7 349 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 GPHA2Q96T91 129 aa13.96□□□□□ -0.17
COL7A1-205ENST00000465238 AURKAIP1Q9NWT8 199 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-205ENST00000465238 METTL1Q9UBP6 276 aaKnown RBP13.96□□□□□ -0.17
COL7A1-205ENST00000465238 TSSC4Q9Y5U2 329 aaPredicted RBP13.96□□□□□ -0.17
COL7A1-205ENST00000465238 TCRBV4S1A1TA0A5B7 111 aa13.95□□□□□ -0.18
COL7A1-205ENST00000465238 ANKRD20A5PA0PJZ0 165 aa13.95□□□□□ -0.18
COL7A1-205ENST00000465238 KIR2DS2P43631 304 aa13.95□□□□□ -0.18
COL7A1-205ENST00000465238 UCP3P55916 312 aa13.95□□□□□ -0.18
COL7A1-205ENST00000465238 ZNF79Q15937 498 aa13.95□□□□□ -0.18
COL7A1-205ENST00000465238 SCGB2B2Q4G0G5 96 aa13.95□□□□□ -0.18
COL7A1-205ENST00000465238 TCTEX1D4Q5JR98 221 aa13.95□□□□□ -0.18
COL7A1-205ENST00000465238 AADACL3Q5VUY0 350 aa13.95□□□□□ -0.18
COL7A1-205ENST00000465238 OR4X2Q8NGF9 303 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms