RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 LYPD6BQ8NI32 183 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 H1FXQ92522 213 aaKnown RBP10.52□□□□□ -0.73
VAPB-203ENST00000463370 OR4C12Q96R67 309 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 QTRT1Q9BXR0 403 aaKnown RBP10.52□□□□□ -0.73
VAPB-203ENST00000463370 TMA7Q9Y2S6 64 aaKnown RBP10.52□□□□□ -0.73
VAPB-203ENST00000463370 TACC2O95359 2948 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 ARFGEF3Q5TH69 2177 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 ABCA4P78363 2273 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 TRAV3A0A0B4J244 114 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 A0A1B0GV50 99 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 TMEM218A2RU14 115 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 C9JQL5 133 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 FAM90A26D6RGX4 464 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 ITGB1BP1O14713 200 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 RBMXL2O75526 392 aaKnown RBP10.52□□□□□ -0.73
VAPB-203ENST00000463370 RAB7AP51149 207 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 BLOC1S1P78537 153 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 MRPS11P82912 194 aaKnown RBP10.52□□□□□ -0.73
VAPB-203ENST00000463370 UQCC3Q6UW78 93 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 IL34Q6ZMJ4 242 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 COL12A1Q99715 3063 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 LY6HO94772 140 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 HPRT1P00492 218 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 PRH1P02810 166 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 CAMLGP49069 296 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 F2RL1P55085 397 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.51□□□□□ -0.73
VAPB-203ENST00000463370 CD300LFQ8TDQ1 290 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 S1PR3Q99500 378 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 TSNAXQ99598 290 aaKnown RBP10.51□□□□□ -0.73
VAPB-203ENST00000463370 DSCAML1Q8TD84 2053 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 F12P00748 615 aaPredicted RBP10.51□□□□□ -0.73
VAPB-203ENST00000463370 TAS2R30P59541 319 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 TAGLNQ01995 201 aaKnown RBP10.51□□□□□ -0.73
VAPB-203ENST00000463370 OR8G2PQ6IF36 304 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 TMEM14EPQ6UXP3 125 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 SLC25A48Q6ZT89 311 aaKnown RBP10.51□□□□□ -0.73
VAPB-203ENST00000463370 ZNF525Q8N782 197 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 FAM213BQ8TBF2 198 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 DTD1Q8TEA8 209 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 TMEM204Q9BSN7 226 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 NUP50Q9UKX7 468 aa10.51□□□□□ -0.73
VAPB-203ENST00000463370 NDUFB3O43676 98 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 ATG12O94817 140 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 PLA2G5P39877 138 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 FAM216AQ8WUB2 273 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 ZNF714Q96N38 554 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 RSG1Q9BU20 258 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 RAB9BQ9NP90 201 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 TREM1Q9NP99 234 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 GAB2Q9UQC2 676 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 LAMP3Q9UQV4 416 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 ASH1LQ9NR48 2969 aaKnown RBP10.5□□□□□ -0.73
VAPB-203ENST00000463370 DEFA5Q01523 94 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 MEF2CQ06413 473 aaPredicted RBP10.5□□□□□ -0.73
VAPB-203ENST00000463370 HFEQ30201 348 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 LRRC10Q5BKY1 277 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 THNSL2Q86YJ6 484 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 PRELID3BQ9Y3B1 194 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 FBXO7Q9Y3I1 522 aa10.5□□□□□ -0.73
VAPB-203ENST00000463370 RBFOX2O43251 390 aaKnown RBP eCLIP10.49□□□□□ -0.738e-6■■□□□ 11.5
VAPB-203ENST00000463370 CT45A6P0DMU7 189 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 CT45A5P0DMU8 189 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 CT45A7P0DMV0 189 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 HNF4GQ14541 408 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 GUCA2BQ16661 112 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 HEPN1Q6WQI6 88 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 LRRC46Q96FV0 321 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 GAL3ST2Q9H3Q3 398 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 TMEM140Q9NV12 185 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 UQCC1Q9NVA1 299 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
VAPB-203ENST00000463370 A0A1W2PPR1 153 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 PMS2P5A8MQ11 134 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 CEBPZOSA8MTT3 80 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 NUDT19A8MXV4 375 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 TSPAN15O95858 294 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 IGKV1-16P04430 117 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 DLX1P56177 255 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 CCL20P78556 96 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 PRB3Q04118 309 aaPredicted RBP10.48□□□□□ -0.73
VAPB-203ENST00000463370 BTN1A1Q13410 526 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.48□□□□□ -0.73
VAPB-203ENST00000463370 SCRT1Q9BWW7 348 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 KAAG1Q9UBP8 84 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 FAM157AC9JC47 383 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 RNASEK-C17orf49H0YIS7 233 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 GPR37O15354 613 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 DFFBO76075 338 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 CD5P06127 495 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 SOD3P08294 240 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 SFTPCP11686 197 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 NQO2P16083 231 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 SNCAP37840 140 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 RAB5CP51148 216 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 DLX6P56179 175 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 RELBQ01201 579 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 SLC38A11Q08AI6 406 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 DIAPH2-AS1Q14236 149 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 AVPI1Q5T686 147 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms