RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 SPIN2BQ9BPZ2 258 aa12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 SAV1Q9H4B6 383 aaPredicted RBP12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 RPS10-NUDT3A0A1W2PQS6 291 aa12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 NUPL2O15504 423 aaKnown RBP12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 ARF6P62330 175 aa12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 S100A12P80511 92 aa12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 DMBX1Q8NFW5 382 aa12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 OR9G1Q8NH87 305 aa12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 RNASE11Q8TAA1 199 aaKnown RBP12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 CACNG5Q9UF02 275 aa12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 RCL1Q9Y2P8 373 aaKnown RBP12.22□□□□□ -0.45
RPRD1B-203ENST00000462548 DOPEY2Q9Y3R5 2298 aa12.21□□□□□ -0.45
RPRD1B-203ENST00000462548 IGHV2-26A0A0B4J1V2 119 aa12.21□□□□□ -0.45
RPRD1B-203ENST00000462548 ST6GALNAC6Q969X2 333 aa12.21□□□□□ -0.45
RPRD1B-203ENST00000462548 S1PR3Q99500 378 aa12.21□□□□□ -0.45
RPRD1B-203ENST00000462548 MAGT1Q9H0U3 335 aa12.21□□□□□ -0.45
RPRD1B-203ENST00000462548 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.45
RPRD1B-203ENST00000462548 POMT1Q9Y6A1 747 aa12.21□□□□□ -0.45
RPRD1B-203ENST00000462548 CENPEQ02224 2701 aa12.21□□□□□ -0.45
RPRD1B-203ENST00000462548 A0A1B0GU03 582 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 A0A1W2PPH5 198 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 RBP4P02753 201 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 S100A11P31949 105 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 REG1BP48304 166 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 THBS3P49746 956 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 LCN2P80188 198 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 ID3Q02535 119 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 PAX2Q02962 417 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 ZNF787Q6DD87 383 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 ACOT7LQ6ZUV0 252 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 KCNRGQ8N5I3 272 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 C10orf105Q8TEF2 133 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 C12orf57Q99622 126 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 MRPL20Q9BYC9 149 aaKnown RBP12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 ARL6Q9H0F7 186 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 C11orf1Q9H5F2 150 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 MMP24Q9Y5R2 645 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 PTPN13Q12923 2485 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 CELSR2Q9HCU4 2923 aa12.21□□□□□ -0.46
RPRD1B-203ENST00000462548 ST8SIA3O43173 380 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 COX7A1P24310 79 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 NKX2-1P43699 371 aaPredicted RBP12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 SMCO1Q147U7 214 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 MIDNQ504T8 468 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 OR10X1Q8NGY0 326 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 FAM168AQ92567 244 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 SIRT7Q9NRC8 400 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 VWC2LB2RUY7 222 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 IGLV1-47P01700 117 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 SLC25A6P12236 298 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 RPL35P42766 123 aaKnown RBP12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 MS4A7Q9GZW8 240 aaPredicted RBP12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 MMP26Q9NRE1 261 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 POLQO75417 2590 aa12.2□□□□□ -0.46
RPRD1B-203ENST00000462548 ABCA2Q9BZC7 2435 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 IGHV4-30-2A0A087WSY4 118 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 IGHV4-61A0A0C4DH41 118 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 RBFOX2O43251 390 aaKnown RBP eCLIP12.19□□□□□ -0.465e-7■■□□□ 12.8
RPRD1B-203ENST00000462548 OR2F2O95006 317 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 HPRT1P00492 218 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 PET100P0DJ07 73 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 BTF3P20290 206 aaKnown RBP12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 OR2F1Q13607 317 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 ZNF345Q14585 488 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 VKORC1L1Q8N0U8 176 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 R3HDM4Q96D70 268 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 LINC00052Q96N35 136 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 PLEKHA2Q9HB19 425 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 VPS13CQ709C8 3753 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 MARCH11A6NNE9 402 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 A8MXK9 166 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 TMEM50AO95807 157 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 HKR1P10072 659 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 ZNF137PP52743 207 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 HCP5Q6MZN7 132 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 PNKDQ8N490 385 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 INO80EQ8NBZ0 244 aaPredicted RBP12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 ADTRPQ96IZ2 230 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 PIMREGQ9BSJ6 248 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 CLEC7AQ9BXN2 247 aa12.19□□□□□ -0.46
RPRD1B-203ENST00000462548 PIGBOS1A0A0B4J2F0 54 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 FAM157AC9JC47 383 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 CFDP00746 253 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 RLN2P04090 185 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 RRASP10301 218 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 PAX1P15863 534 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 KIR2DS2P43631 304 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 KLRD1Q13241 179 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 LDLRAD2Q5SZI1 272 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 SSX9Q7RTT3 188 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 NABP2Q9BQ15 211 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 BARX1Q9HBU1 254 aaPredicted RBP12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 A0A0D9SG52 128 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 M0R1W7 72 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 SSSCA1O60232 199 aa12.18□□□□□ -0.46
RPRD1B-203ENST00000462548 IGKV1-16P04430 117 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms