RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CBX3Q13185 183 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 ABCA11PQ4W5N1 156 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 TMEM177Q53S58 311 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 OR2B11Q5JQS5 317 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 IDO2Q6ZQW0 420 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 CMTM1Q8IZ96 169 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 FAM71E2Q8N5Q1 922 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 Q8N9W7 124 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 NPBQ8NG41 125 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 OR4F5Q8NH21 305 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 MARCH1Q8TCQ1 289 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 FLYWCH2Q96CP2 140 aaKnown RBP9.38□□□□□ -0.91
CPNE1-221ENST00000462352 MDFIQ99750 246 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 RNF5Q99942 180 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 PRSS22Q9GZN4 317 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 C16orf95Q9H693 158 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 ZNF702PQ9H963 129 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 SCP2D1Q9UJQ7 156 aa9.38□□□□□ -0.91
CPNE1-221ENST00000462352 NDUFA3O95167 84 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 CRYZL1O95825 349 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 RLN1P04808 185 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 PI3P19957 117 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-221ENST00000462352 CD40LGP29965 261 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 ECI1P42126 302 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 FOXL1Q12952 345 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 PHLDA2Q53GA4 152 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 Q6ZS46 218 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 OR13C8Q8NGS7 320 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 OR51H1Q8NH63 302 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 LINC01006Q8NI28 216 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 ZNF486Q96H40 463 aaPredicted RBP9.37□□□□□ -0.91
CPNE1-221ENST00000462352 HARBI1Q96MB7 349 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 CCDC32Q9BV29 185 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 WDR12Q9GZL7 423 aaKnown RBP9.37□□□□□ -0.91
CPNE1-221ENST00000462352 SLC2A9Q9NRM0 540 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
CPNE1-221ENST00000462352 KIAA1456Q9P272 454 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 SIGLEC9Q9Y336 463 aa9.37□□□□□ -0.91
CPNE1-221ENST00000462352 LINC00854A0A1B0GVQ3 168 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 RRHO14718 337 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 SHOXO15266 292 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 IGLV2-23P01705 113 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 CTSDP07339 412 aaPredicted RBP9.36□□□□□ -0.91
CPNE1-221ENST00000462352 S100GP29377 79 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 KIR2DS2P43631 304 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 LGALS7P47929 136 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 PSG5Q15238 335 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 SURF2Q15527 256 aaPredicted RBP9.36□□□□□ -0.91
CPNE1-221ENST00000462352 C5orf64Q2M2E5 130 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 C9orf152Q5JTZ5 239 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 SPAG16Q8N0X2 631 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 Q8N2B8 174 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 OR4S2Q8NH73 311 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 OR2T6Q8NHC8 308 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
CPNE1-221ENST00000462352 ZFAND1Q8TCF1 268 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 TSNAXQ99598 290 aaKnown RBP9.36□□□□□ -0.91
CPNE1-221ENST00000462352 RASL11BQ9BPW5 248 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 FBXL15Q9H469 300 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 BEX1Q9HBH7 125 aa9.36□□□□□ -0.91
CPNE1-221ENST00000462352 A0A1B0GUS0 222 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 CLPSL1A2RUU4 121 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 NAP1L6A6NFF2 107 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 SRRM4A7MD48 611 aaKnown RBP9.35□□□□□ -0.91
CPNE1-221ENST00000462352 RBFOX2O43251 390 aaKnown RBP eCLIP9.35□□□□□ -0.917e-7■□□□□ 10.1
CPNE1-221ENST00000462352 RAMP3O60896 148 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 SPDEFO95238 335 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 F2RP25116 425 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 COMPP49747 757 aaPredicted RBP9.35□□□□□ -0.91
CPNE1-221ENST00000462352 PIGPP57054 158 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 RND3P61587 244 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 AWAT1Q58HT5 328 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 ARSJQ5FYB0 599 aaPredicted RBP9.35□□□□□ -0.91
CPNE1-221ENST00000462352 TBC1D26Q86UD7 250 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 POC5Q8NA72 575 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 C5orf66Q9H5L9 145 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 METTL1Q9UBP6 276 aaKnown RBP9.35□□□□□ -0.91
CPNE1-221ENST00000462352 GPR132Q9UNW8 380 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 C14orf166Q9Y224 244 aaKnown RBP9.35□□□□□ -0.91
CPNE1-221ENST00000462352 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 MMP24Q9Y5R2 645 aa9.35□□□□□ -0.91
CPNE1-221ENST00000462352 CENPXA8MT69 81 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 MPPED1O15442 326 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 PLA2G10O15496 165 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 SLC25A17O43808 307 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 HPRT1P00492 218 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 IGHG2P01859 326 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 HLA-DRB1P01911 266 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 VSIG10L2P0DP72 767 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 PLGLAQ15195 96 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 TMEM95Q3KNT9 176 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 LIN54Q6MZP7 749 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 TCTEX1D1Q8N7M0 179 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 CCDC71LQ8N9Z2 235 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 CD300LFQ8TDQ1 290 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 HSPB9Q9BQS6 159 aa9.34□□□□□ -0.91
CPNE1-221ENST00000462352 C7orf50Q9BRJ6 194 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms