RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 BUB1B-PAK6H3BSN5 160 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 CCSO14618 274 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 FCGR3BO75015 233 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 PROP1O75360 226 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 ADAP1O75689 374 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 SIX6O95475 246 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 GAPDHP04406 335 aaKnown RBP12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 RRASP10301 218 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 EPHA1P21709 976 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 SRP14P37108 136 aaKnown RBP12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 PAX8Q06710 450 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 RTL8BQ17RB0 113 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 KRTAP24-1Q3LI83 254 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 SELENOHQ8IZQ5 122 aaKnown RBP12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 TEX29Q8N6K0 151 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 SLC35G3Q8N808 338 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 OR4S2Q8NH73 311 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 RPEQ96AT9 228 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 RRNAD1Q96FB5 475 aaKnown RBP12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 SPIN2AQ99865 258 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 SPIN2BQ9BPZ2 258 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 ZNF251Q9BRH9 671 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 ZNRD1Q9P1U0 126 aa12.32□□□□□ -0.44
TMEM39A-203ENST00000461654 LINC00473A8K010 186 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 RBFOX2O43251 390 aaKnown RBP eCLIP12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 HNRNPCP07910 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 VDAC1P21796 283 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 AKR1C2P52895 323 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 DLX1P56177 255 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 ZNF816Q0VGE8 651 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 C2orf68Q2NKX9 166 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 THOC7Q6I9Y2 204 aaKnown RBP12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 LYZL2Q7Z4W2 148 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 TCTE3Q8IZS6 198 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 OR4P4Q8NGL7 312 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 LHX4Q969G2 390 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 ST6GAL2Q96JF0 529 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 DPM3Q9P2X0 92 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 AUP1Q9Y679 476 aa12.31□□□□□ -0.44
TMEM39A-203ENST00000461654 H7C2Y5 167 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 J3QLI3 93 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 OR2A4O95047 310 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 HPRT1P00492 218 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 CT45A6P0DMU7 189 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 CT45A5P0DMU8 189 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 CT45A7P0DMV0 189 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 MMP9P14780 707 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 MC5RP33032 325 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 REG1BP48304 166 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 UBE2E1P51965 193 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 H2BFSP57053 126 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 ERVK-16P61578 105 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 PRB3Q04118 309 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 KLRD1Q13241 179 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 IAH1Q2TAA2 248 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 MINOS1Q5TGZ0 78 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 DHRS7BQ6IAN0 325 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 LHFPL5Q8TAF8 219 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 ST6GALNAC6Q969X2 333 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 C2orf50Q96LR7 162 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 OR2A7Q96R45 310 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 AIFM2Q9BRQ8 373 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 MRPL20Q9BYC9 149 aaKnown RBP12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 C7orf69Q9H7B7 122 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 MINOS1-NBL1R4GNA1 71 aa12.3□□□□□ -0.44
TMEM39A-203ENST00000461654 MXRA5Q9NR99 2828 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 ODF3BA8MYP8 253 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 RNASEK-C17orf49H0YIS7 233 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 TCF21O43680 179 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 RAMP3O60896 148 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 RAB13P51153 203 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 ARHGDIBP52566 201 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 FGL1Q08830 312 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 SCGB2A2Q13296 93 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 ZFP69Q49AA0 526 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 ZNF585BQ52M93 769 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 TPTE2P1Q5T6R2 138 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 CCDC144NLQ6NUI1 221 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 FAM219AQ8IW50 185 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 PDZD9Q8IXQ8 264 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 ZNF383Q8NA42 475 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 DDB2Q92466 427 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 LSM10Q969L4 123 aaKnown RBP12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 SEC22AQ96IW7 307 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 GSKIPQ9P0R6 139 aa12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 TBL2Q9Y4P3 447 aaKnown RBP12.29□□□□□ -0.44
TMEM39A-203ENST00000461654 DOCK11Q5JSL3 2073 aa12.28□□□□□ -0.44
TMEM39A-203ENST00000461654 SVEP1Q4LDE5 3571 aa12.28□□□□□ -0.44
TMEM39A-203ENST00000461654 A0A1W2PRD5 423 aa12.28□□□□□ -0.44
TMEM39A-203ENST00000461654 A0A1W2PRF3 423 aa12.28□□□□□ -0.44
TMEM39A-203ENST00000461654 A0A1W2PRM7 423 aa12.28□□□□□ -0.44
TMEM39A-203ENST00000461654 OOSP1A8MZH6 123 aa12.28□□□□□ -0.44
TMEM39A-203ENST00000461654 S1PR2O95136 353 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms