RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 RAB40CQ96S21 281 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SPSB2Q99619 263 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MAP1LC3BQ9GZQ8 125 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SLC2A9Q9NRM0 540 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DKK4Q9UBT3 224 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ICAM5Q9UMF0 924 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CLEC18AA5D8T8 446 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 J3QR89 54 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SPINK4O60575 86 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PAX1P15863 534 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 OR10J1P30954 320 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SURF2Q15527 256 aaPredicted RBP5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 KISS1Q15726 138 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZIC1Q15915 447 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 GTF2H5Q6ZYL4 71 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CLEC18CQ8NCF0 446 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SLC26A10Q8NG04 563 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 OR8B12Q8NGG6 310 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MRPL30Q8TCC3 161 aaKnown RBP5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 VCX2Q9H322 139 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 Q9N2K0 584 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 METTL1Q9UBP6 276 aaKnown RBP5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZNF107Q9UII5 783 aaPredicted RBP5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PSG11Q9UQ72 335 aa5.37□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 A6NNC1 897 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 B4DEV8 164 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SPINT1O43278 529 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CDX1P47902 265 aaPredicted RBP5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SELENOTP62341 195 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PNRC1Q12796 327 aaPredicted RBP5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 BSXQ3C1V8 233 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MESTQ5EB52 335 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZNF738Q8NE65 137 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TNFRSF14Q92956 283 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CTDSP1Q9GZU7 261 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SH2D2AQ9NP31 389 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 NAT8Q9UHE5 227 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 KLHDC2Q9Y2U9 406 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PCM1Q15154 2024 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CELA3BP08861 270 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CT62P0C5K7 136 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CEACAM6P40199 344 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 LPAR6P43657 344 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 LHX2P50458 406 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZP4Q12836 540 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ACSF3Q4G176 576 aaPredicted RBP5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TMEM177Q53S58 311 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MINOS1Q5TGZ0 78 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CDCP2Q5VXM1 449 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZNF547Q8IVP9 402 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MINOS1-NBL1R4GNA1 71 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TRAV8-6A0A0B4J262 113 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CENPVL1A0A0U1RR11 272 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PRDX2P32119 198 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ERVFC1-1P60608 527 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MGAT2Q10469 447 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TMEM255AQ5JRV8 349 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DPPA3Q6W0C5 159 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PRSS41Q7RTY9 318 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PDPNQ86YL7 162 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SGK494Q96LW2 274 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 A0A1W2PR80 420 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 C1QTNF9BB2RNN3 333 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 NPFFO15130 113 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZNF205O95201 554 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CTSDP07339 412 aaPredicted RBP5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 C1QTNF9P0C862 333 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 CTLA4P16410 223 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 HLA-GP17693 338 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 BTCP35070 178 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZFP36L1Q07352 338 aaKnown RBP5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 UNC119Q13432 240 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TMEM97Q5BJF2 176 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FA2HQ7L5A8 372 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TMEM116Q8NCL8 245 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 MAP1LC3CQ9BXW4 147 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 BET1LQ9NYM9 111 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 HIGD1AQ9Y241 93 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PDE4DIPQ5VU43 2346 aa5.36□□□□□ -1.55
HLA-DQA1-205ENST00000460633 LIPT2A6NK58 231 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 FCN1O00602 326 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TNFSF13O75888 250 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ZNF154Q13106 437 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DHRS11Q6UWP2 260 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PAQR4Q8N4S7 273 aaPredicted RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DYRK2Q92630 601 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 DMRTA2Q96SC8 542 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TECRQ9NZ01 308 aaKnown RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PAM16Q9Y3D7 125 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 IGSF23A1L1A6 192 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 TMEM262E9PQX1 116 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 UPK2O00526 184 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 C1QL1O75973 258 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SLC25A5P05141 298 aaKnown RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 RIGQ13278 110 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 SELENOHQ8IZQ5 122 aaKnown RBP5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 ARPC1AQ92747 370 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PRSS27Q9BQR3 290 aa5.35□□□□□ -1.55
HLA-DQA1-205ENST00000460633 PRADC1Q9BSG0 188 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms