RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 TP53RKQ96S44 253 aa8.61□□□□□ -1.03
FN1-214ENST00000460217 RNF5Q99942 180 aa8.61□□□□□ -1.03
FN1-214ENST00000460217 PLEKHA2Q9HB19 425 aa8.61□□□□□ -1.03
FN1-214ENST00000460217 SLC35D1Q9NTN3 355 aa8.61□□□□□ -1.03
FN1-214ENST00000460217 SOX21Q9Y651 276 aaPredicted RBP8.61□□□□□ -1.03
FN1-214ENST00000460217 MXRA5Q9NR99 2828 aa8.61□□□□□ -1.03
FN1-214ENST00000460217 PIGBOS1A0A0B4J2F0 54 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 C9orf170A2RU37 121 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 RAMP3O60896 148 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 FCGR3BO75015 233 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 DUS4LO95620 317 aaKnown RBP8.6□□□□□ -1.03
FN1-214ENST00000460217 CDS2O95674 445 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 DHFRP00374 187 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 IFNA2P01563 188 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 HLA-AP01891 365 aaKnown RBP8.6□□□□□ -1.03
FN1-214ENST00000460217 IGKV1-16P04430 117 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 OR5AC1P0C628 307 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 FAM106CPP0CH98 169 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 ANXA3P12429 323 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 RPA2P15927 270 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 VAMP1P23763 118 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 PAX6P26367 422 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 RAB25P57735 213 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 SRPXP78539 464 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 CBX3Q13185 183 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 C4orf46Q504U0 113 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 Q6YL49 198 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 LYG2Q86SG7 212 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 LRTM2Q8N967 370 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 OSR1Q8TAX0 266 aaPredicted RBP8.6□□□□□ -1.03
FN1-214ENST00000460217 PIFOQ8TCI5 191 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 GLYATL2Q8WU03 294 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 C22orf15Q8WYQ4 148 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 ZNF48Q96MX3 618 aaPredicted RBP8.6□□□□□ -1.03
FN1-214ENST00000460217 SSX3Q99909 188 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 TMEM222Q9H0R3 208 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 COMMD9Q9P000 198 aa8.6□□□□□ -1.03
FN1-214ENST00000460217 IGHV3-72A0A0B4J1Y9 119 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 A0A0B4J2A0 478 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 MDFIC2A0A1B0GVS7 189 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 C7orf66A4D0T2 115 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 SNRPGP15A8MWD9 76 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 H7C2Y5 167 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 CRYZL1O95825 349 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 HPRT1P00492 218 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 MOSP00540 346 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 IGKV1D-33P01593 117 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 IGKV1-33P01594 117 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 SERPINE2P07093 398 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 SNRNP70P08621 437 aaKnown RBP8.59□□□□□ -1.03
FN1-214ENST00000460217 IER3P46695 156 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 LGALS7P47929 136 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 TMEM187Q14656 261 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 POU2AF1Q16633 256 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 TATDN3Q17R31 274 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 SP6Q3SY56 376 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 TMEM177Q53S58 311 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 OR2B11Q5JQS5 317 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 Q71RC1 249 aaPredicted RBP8.59□□□□□ -1.03
FN1-214ENST00000460217 CADM3Q8N126 398 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 Q8N6K4 173 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 OR8H1Q8NGG4 311 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 OR2T10Q8NGZ9 312 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 OR5R1Q8NH85 324 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 ZNF431Q8TF32 576 aaPredicted RBP8.59□□□□□ -1.03
FN1-214ENST00000460217 MITD1Q8WV92 249 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 SSMEM1Q8WWF3 244 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 IL22RA2Q969J5 263 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 FLYWCH2Q96CP2 140 aaKnown RBP8.59□□□□□ -1.03
FN1-214ENST00000460217 EAF1Q96JC9 268 aaPredicted RBP8.59□□□□□ -1.03
FN1-214ENST00000460217 TMEM56Q96MV1 263 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 AIFM2Q9BRQ8 373 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 BEX1Q9HBH7 125 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 GPN1Q9HCN4 374 aaPredicted RBP8.59□□□□□ -1.03
FN1-214ENST00000460217 SHPKQ9UHJ6 478 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 TMEM56-RWDD3S4R434 201 aa8.59□□□□□ -1.03
FN1-214ENST00000460217 ANK3Q12955 4377 aaKnown RBP8.59□□□□□ -1.04
FN1-214ENST00000460217 A0A0B4J293 547 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 CRLF1O75462 422 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 SPDEFO95238 335 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 FAM157CP0CG43 387 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 LPAR6P43657 344 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 SLC9A3R2Q15599 337 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 ANKRD55Q3KP44 614 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 LGI3Q8N145 548 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 TMEM86BQ8N661 226 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 RBPMSQ93062 196 aaKnown RBP8.58□□□□□ -1.04
FN1-214ENST00000460217 SEC22CQ9BRL7 303 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 TCF19Q9Y242 345 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 POMT1Q9Y6A1 747 aa8.58□□□□□ -1.04
FN1-214ENST00000460217 DUXBA0A1W2PPF3 345 aa8.57□□□□□ -1.04
FN1-214ENST00000460217 A6NDX4 124 aa8.57□□□□□ -1.04
FN1-214ENST00000460217 BTBD17A6NE02 478 aa8.57□□□□□ -1.04
FN1-214ENST00000460217 H3BUX3 64 aa8.57□□□□□ -1.04
FN1-214ENST00000460217 SHOXO15266 292 aa8.57□□□□□ -1.04
FN1-214ENST00000460217 CREBL2O60519 120 aaPredicted RBP8.57□□□□□ -1.04
FN1-214ENST00000460217 ATG12O94817 140 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms