RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 DDB2Q92466 427 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 PARP11Q9NR21 331 aa17.15■□□□□ 0.34
SSNA1-202ENST00000459860 SLC25A17O43808 307 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 CRYZL1O95825 349 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 TSPAN5P62079 268 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 IL18Q14116 193 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 HIST2H2BDQ6DRA6 164 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 ZNF329Q86UD4 541 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 ABHD5Q8WTS1 349 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 DCUN1D5Q9BTE7 237 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 RBM38Q9H0Z9 239 aaKnown RBP17.14■□□□□ 0.33
SSNA1-202ENST00000459860 MMP27Q9H306 513 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 OR51J1Q9H342 316 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 CCL28Q9NRJ3 127 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 TAS2R8Q9NYW2 309 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 ZNF580Q9UK33 172 aa17.14■□□□□ 0.33
SSNA1-202ENST00000459860 TSSC4Q9Y5U2 329 aaPredicted RBP17.14■□□□□ 0.33
SSNA1-202ENST00000459860 IGHV7-81A0A0B4J1V7 117 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 FCGR3BO75015 233 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 IGLV2-14P01704 120 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 IGF1P05019 195 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 CD83Q01151 205 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 CATR1Q13166 79 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 PYHIN1Q6K0P9 492 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 C10orf99Q6UWK7 81 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 DHRS11Q6UWP2 260 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 LYSMD2Q8IV50 215 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 OR52I2Q8NH67 350 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 OSR1Q8TAX0 266 aaPredicted RBP17.13■□□□□ 0.33
SSNA1-202ENST00000459860 ABHD1Q96SE0 405 aa17.13■□□□□ 0.33
SSNA1-202ENST00000459860 GABARAPH6UMI1 98 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 ATP6V0E1O15342 81 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 TSPAN15O95858 294 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 KIR2DS2P43631 304 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 VMA21Q3ZAQ7 101 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 OR2B11Q5JQS5 317 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 ZNF660Q6AZW8 331 aaPredicted RBP17.12■□□□□ 0.33
SSNA1-202ENST00000459860 TEX38Q6PEX7 206 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 MFSD4AQ8N468 514 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 OR4S2Q8NH73 311 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 MOB3AQ96BX8 217 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 CLCC1Q96S66 551 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 MTFP1Q9UDX5 166 aa17.12■□□□□ 0.33
SSNA1-202ENST00000459860 A0A1W2PRX2 142 aa17.11■□□□□ 0.33
SSNA1-202ENST00000459860 TNFSF12O43508 249 aa17.11■□□□□ 0.33
SSNA1-202ENST00000459860 IFNA6P05013 189 aa17.11■□□□□ 0.33
SSNA1-202ENST00000459860 RNASE10Q5GAN6 216 aaKnown RBP17.11■□□□□ 0.33
SSNA1-202ENST00000459860 PPP1R27Q86WC6 154 aa17.11■□□□□ 0.33
SSNA1-202ENST00000459860 OR4F17Q8NGA8 305 aa17.11■□□□□ 0.33
SSNA1-202ENST00000459860 OR4F4Q96R69 305 aa17.11■□□□□ 0.33
SSNA1-202ENST00000459860 NXF2Q9GZY0 626 aaKnown RBP17.11■□□□□ 0.33
SSNA1-202ENST00000459860 KLK11Q9UBX7 282 aa17.11■□□□□ 0.33
SSNA1-202ENST00000459860 CA2P00918 260 aa17.1■□□□□ 0.33
SSNA1-202ENST00000459860 TBPP20226 339 aa17.1■□□□□ 0.33
SSNA1-202ENST00000459860 S100A5P33763 92 aa17.1■□□□□ 0.33
SSNA1-202ENST00000459860 RPL30P62888 115 aaKnown RBP17.1■□□□□ 0.33
SSNA1-202ENST00000459860 CX3CL1P78423 397 aa17.1■□□□□ 0.33
SSNA1-202ENST00000459860 SSBP1Q04837 148 aaKnown RBP17.1■□□□□ 0.33
SSNA1-202ENST00000459860 VAX1Q5SQQ9 334 aa17.1■□□□□ 0.33
SSNA1-202ENST00000459860 FAM110DQ8TAY7 271 aaPredicted RBP17.1■□□□□ 0.33
SSNA1-202ENST00000459860 R3HDM4Q96D70 268 aa17.1■□□□□ 0.33
SSNA1-202ENST00000459860 NDUFA13Q9P0J0 144 aa17.1■□□□□ 0.33
SSNA1-202ENST00000459860 TRAV41A0A0B4J266 112 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 CREBL2O60519 120 aaPredicted RBP17.09■□□□□ 0.33
SSNA1-202ENST00000459860 IGLV2-23P01705 113 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 PF4V1P10720 104 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 S100GP29377 79 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 TAS2R19P59542 299 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 DGCR2P98153 550 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 EIF4EBP1Q13541 118 aaPredicted RBP17.09■□□□□ 0.33
SSNA1-202ENST00000459860 TCTEX1D4Q5JR98 221 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 CXorf66Q5JRM2 361 aaPredicted RBP17.09■□□□□ 0.33
SSNA1-202ENST00000459860 LPCAT3Q6P1A2 487 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 ZNF562Q6V9R5 426 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 ZNF818PQ6ZRF7 136 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 CMTM1Q8IZ96 169 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 POC5Q8NA72 575 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 SMIM4Q8WVI0 70 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 FXYD6Q9H0Q3 95 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 WSB1Q9Y6I7 421 aa17.09■□□□□ 0.33
SSNA1-202ENST00000459860 M0QYG6 137 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 CTDSPLO15194 276 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 CNIH1O95406 144 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 ELANEP08246 267 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 UBE2KP61086 200 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 GNB1P62873 340 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 TMEM267Q0VDI3 215 aaPredicted RBP17.08■□□□□ 0.32
SSNA1-202ENST00000459860 FOXE3Q13461 319 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 ECSCRQ19T08 205 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 AADACL3Q5VUY0 350 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 TCTEX1D1Q8N7M0 179 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 TEX45Q8NA69 505 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 ARPC1AQ92747 370 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 TPSG1Q9NRR2 321 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 ZFP57Q9NU63 452 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 A3GALT2U3KPV4 340 aa17.08■□□□□ 0.32
SSNA1-202ENST00000459860 FABP12A6NFH5 140 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 FCN1O00602 326 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 CD3DP04234 171 aa17.07■□□□□ 0.32
SSNA1-202ENST00000459860 GNRHRP30968 328 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms