RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 LCN8Q6JVE9 175 aa0.39□□□□□ -2.35
SNORD42A-201ENST00000459584 FAM173BQ6P4H8 233 aa0.39□□□□□ -2.35
SNORD42A-201ENST00000459584 ZNF675Q8TD23 568 aa0.39□□□□□ -2.35
SNORD42A-201ENST00000459584 SLC7A6Q92536 515 aa0.39□□□□□ -2.35
SNORD42A-201ENST00000459584 RORBQ92753 470 aa0.39□□□□□ -2.35
SNORD42A-201ENST00000459584 OR7D2Q96RA2 312 aa0.39□□□□□ -2.35
SNORD42A-201ENST00000459584 TMEM208Q9BTX3 173 aa0.39□□□□□ -2.35
SNORD42A-201ENST00000459584 RBM7Q9Y580 266 aaKnown RBP0.39□□□□□ -2.35
SNORD42A-201ENST00000459584 EML6Q6ZMW3 1958 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 GLI3P10071 1580 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 A0A087WUU8 490 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 A0A0D9SEW6 157 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 TRAPPC13A5PLN9 417 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 LIN7AO14910 233 aaPredicted RBP0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 GP1BAP07359 652 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 CA5AP35218 305 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 CRATP43155 626 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 DLX6P56179 175 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 BTN3A2P78410 334 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 ELOBQ15370 118 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 OR4D1Q15615 310 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 KRTAP19-3Q7Z4W3 81 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 OR13C8Q8NGS7 320 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 DYNC2LI1Q8TCX1 351 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 RNASEH2CQ8TDP1 164 aaKnown RBP0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 PPWD1Q96BP3 646 aaKnown RBP0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 TMA16Q96EY4 203 aaKnown RBP0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 IMMP2LQ96T52 175 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 TIMM9Q9Y5J7 89 aa0.38□□□□□ -2.35
SNORD42A-201ENST00000459584 FLT4P35916 1363 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 ANAPC1Q9H1A4 1944 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 COPEO14579 308 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 TPI1P60174 286 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 EXOC3L4Q17RC7 722 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 LFNGQ8NES3 379 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 TLCD1Q96CP7 247 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 CCDC124Q96CT7 223 aaKnown RBP0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 SMIM12Q96EX1 92 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 MSANTD3Q96H12 275 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 TMEM222Q9H0R3 208 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 EMC3Q9P0I2 261 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 STRCQ7RTU9 1775 aa0.37□□□□□ -2.35
SNORD42A-201ENST00000459584 SMARCA4P51532 1647 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 TRAV8-1A0A0A6YYK1 113 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 TRAV38-1A0A0B4J264 116 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 H3BT86 120 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 H7C2G1 150 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 FADS2O95864 444 aaKnown RBP0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 PPBPP02775 128 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 LGALS1P09382 135 aaKnown RBP0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 PVALBP20472 110 aaPredicted RBP0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 CD79BP40259 229 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 RPL28P46779 137 aaKnown RBP0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 TMEM33P57088 247 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 TBPL1P62380 186 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 USF2Q15853 346 aaPredicted RBP0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 MIAQ16674 131 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 DYNAPQ8N1N2 210 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 Q8WTZ3 238 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 CPNE2Q96FN4 548 aaPredicted RBP0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 REG4Q9BYZ8 158 aa0.36□□□□□ -2.35
SNORD42A-201ENST00000459584 TRAV7A0A075B6U4 112 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 SYNGR1O43759 233 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 NPPAP01160 153 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 ATP5G1P05496 136 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 CFL1P23528 166 aaKnown RBP0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 PSMB8P28062 276 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 H2BFSP57053 126 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 SMAGPQ0VAQ4 97 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 C9orf163Q8N9P6 203 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 C12orf43Q96C57 262 aaKnown RBP0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 HDGFL3Q9Y3E1 203 aa0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 TNRC6AQ8NDV7 1962 aaKnown RBP0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 SCAF11Q99590 1463 aaKnown RBP0.35□□□□□ -2.35
SNORD42A-201ENST00000459584 ABCC12Q96J65 1359 aa0.34□□□□□ -2.35
SNORD42A-201ENST00000459584 MUC5BQ9HC84 5762 aaPredicted RBP0.34□□□□□ -2.35
SNORD42A-201ENST00000459584 A0A0J9YW62 118 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 OR6C6A6NF89 314 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 GEMIN2O14893 280 aaKnown RBP0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 SCN2BO60939 215 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 ADAP1O75689 374 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 BRI3O95415 125 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 GRPRP30550 384 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 ETV1P50549 477 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 EMP1P54849 157 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 FXYD7P58549 80 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 TAS2R20P59543 309 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 HPCAP84074 193 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 RBM48Q5RL73 367 aaKnown RBP0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 FAM19A2Q8N3H0 131 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 LRRC45Q96CN5 670 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 MS4A6EQ96DS6 147 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 CYTH2Q99418 400 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 SETD5Q9C0A6 1442 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 ASCL3Q9NQ33 180 aa0.34□□□□□ -2.36
SNORD42A-201ENST00000459584 NAV2Q8IVL1 2488 aa0.33□□□□□ -2.36
SNORD42A-201ENST00000459584 TMEM94Q12767 1356 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms