RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 LYG2Q86SG7 212 aa13.33□□□□□ -0.28
CCDC90B-202ENST00000455220 GLYATL2Q8WU03 294 aa13.33□□□□□ -0.28
CCDC90B-202ENST00000455220 C22orf15Q8WYQ4 148 aa13.33□□□□□ -0.28
CCDC90B-202ENST00000455220 TMEM222Q9H0R3 208 aa13.33□□□□□ -0.28
CCDC90B-202ENST00000455220 A0A0B4J293 547 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 RAMP3O60896 148 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 VENTXO95231 258 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 IFNA2P01563 188 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 HLA-AP01891 365 aaKnown RBP13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 IGKV1-16P04430 117 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 ANXA3P12429 323 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 VAMP1P23763 118 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 BRS3P32247 399 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 EBI3Q14213 229 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 TMEM187Q14656 261 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 RTL8BQ17RB0 113 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 OR4S2Q8NH73 311 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 ZNF48Q96MX3 618 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 FN1P02751 2386 aaKnown RBP13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 MDFIC2A0A1B0GVS7 189 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 SLC9A3R2Q15599 337 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 TATDN3Q17R31 274 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 LRRC75BQ2VPJ9 315 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 SP6Q3SY56 376 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 Q71RC1 249 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 THNSL2Q86YJ6 484 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 OR52B4Q8NGK2 314 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 PIFOQ8TCI5 191 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 SEC22CQ9BRL7 303 aa13.32□□□□□ -0.28
CCDC90B-202ENST00000455220 C7orf66A4D0T2 115 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 INAFM1C9JVW0 142 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 H7C2Y5 167 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 DUS4LO95620 317 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 CDS2O95674 445 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 SNRNP70P08621 437 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 RPA2P15927 270 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 SCGB2A2Q13296 93 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 TMEM177Q53S58 311 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 LIAT1Q6ZQX7 453 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 OR4C13Q8NGP0 309 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 ZNF431Q8TF32 576 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 RBMXL1Q96E39 390 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 TMEM56Q96MV1 263 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 SSX3Q99909 188 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 PLEKHA2Q9HB19 425 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 TMEM56-RWDD3S4R434 201 aa13.31□□□□□ -0.28
CCDC90B-202ENST00000455220 SNRPGP15A8MWD9 76 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 CRYZL1O95825 349 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 HPRT1P00492 218 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 IGKV1D-33P01593 117 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 IGKV1-33P01594 117 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 IGKV1-39P01597 117 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 IGKV1D-39P04432 117 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 SERPINE2P07093 398 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 SRD5A1P18405 259 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 SRPXP78539 464 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 CBX3Q13185 183 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 ANKRD55Q3KP44 614 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 Q6YL49 198 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 Q8N6K4 173 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 LRTM2Q8N967 370 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 LHFPL5Q8TAF8 219 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 OSR1Q8TAX0 266 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 MITD1Q8WV92 249 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 FLYWCH2Q96CP2 140 aaKnown RBP13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 RNF5Q99942 180 aa13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 GPN1Q9HCN4 374 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-202ENST00000455220 A0A0B4J2A0 478 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 S1PR2O95136 353 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 MOSP00540 346 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 FAM106CPP0CH98 169 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 CD24P25063 80 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 LPAR6P43657 344 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 FBLN7Q53RD9 439 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 Q6ZNX1 250 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 OR2T10Q8NGZ9 312 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 CASTOR1Q8WTX7 329 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 IL22RA2Q969J5 263 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 EAF1Q96JC9 268 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 PRR13Q9NZ81 148 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 COMMD9Q9P000 198 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 SHPKQ9UHJ6 478 aa13.29□□□□□ -0.28
CCDC90B-202ENST00000455220 A0A0A6YYJ9 748 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 CREBL2O60519 120 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 IER3P46695 156 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 LGI3Q8N145 548 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 ALG5Q9Y673 324 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 H3BUX3 64 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 LGALS7P47929 136 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 POU2AF1Q16633 256 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 SELENOHQ8IZQ5 122 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 COQ8AQ8NI60 647 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 RBPMSQ93062 196 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 ZDHHC16Q969W1 377 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 RITA1Q96K30 269 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 HARBI1Q96MB7 349 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 PHB2Q99623 299 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 TCF19Q9Y242 345 aa13.28□□□□□ -0.28
CCDC90B-202ENST00000455220 PIGBOS1A0A0B4J2F0 54 aa13.27□□□□□ -0.29
CCDC90B-202ENST00000455220 SRRM4A7MD48 611 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms