RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PHB2Q99623 299 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 NABP2Q9BQ15 211 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF436Q9C0F3 470 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-205ENST00000454569 PIPOXQ9P0Z9 390 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 CUBNO60494 3623 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 IGHV1-69DA0A0B4J2H0 117 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 GOSR2O14653 212 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 NPFFO15130 113 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 DUS4LO95620 317 aaKnown RBP8.86□□□□□ -0.99
SCN9A-205ENST00000454569 IGHV1-69P01742 117 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 CD24P25063 80 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 HTR1DP28221 377 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 SAA4P35542 130 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 TPTE2P1Q5T6R2 138 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 BCL6BQ8N143 479 aaPredicted RBP8.86□□□□□ -0.99
SCN9A-205ENST00000454569 CCDC71LQ8N9Z2 235 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 ZBTB34Q8NCN2 500 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 MITD1Q8WV92 249 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 TCTEX1D2Q8WW35 142 aa8.86□□□□□ -0.99
SCN9A-205ENST00000454569 A0A1W2PPI3 338 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 MPTX1A8MV57 137 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 ADAP1O75689 374 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 SLC22A5O76082 557 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 FSHBP01225 129 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 RPA2P15927 270 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 GATA3P23771 443 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 RAB13P51153 203 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF816Q0VGE8 651 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-205ENST00000454569 MSMO1Q15800 293 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 SSX2Q16385 188 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 KCTD9Q7L273 389 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 SGPP2Q8IWX5 399 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 CMTM1Q8IZ96 169 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.85□□□□□ -0.99
SCN9A-205ENST00000454569 C22orf15Q8WYQ4 148 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 GALNT14Q96FL9 552 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 S1PR3Q99500 378 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 DPM3Q9P2X0 92 aa8.85□□□□□ -0.99
SCN9A-205ENST00000454569 MTORP42345 2549 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 IGHV1-3A0A0C4DH29 117 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 A0A0G2JRQ6 117 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 A0A0U1RQK1 487 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 MDFIC2A0A1B0GVS7 189 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 H0YJW9 148 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 CCSO14618 274 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 FCGR3BO75015 233 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 SIX6O95475 246 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 IFNA2P01563 188 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 IGKV1-16P04430 117 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 UCP1P25874 307 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 LPAR6P43657 344 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 IZUMO4Q1ZYL8 232 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 FAM120AOSQ5T036 256 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 ZNF66Q6ZN08 573 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 TGIF2LXQ8IUE1 241 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 SELENOHQ8IZQ5 122 aaKnown RBP8.84□□□□□ -0.99
SCN9A-205ENST00000454569 SPAG16Q8N0X2 631 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 COQ8AQ8NI60 647 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 CFHR4Q92496 578 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 C18orf12Q96KH6 178 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 HSD17B10Q99714 261 aaKnown RBP8.84□□□□□ -0.99
SCN9A-205ENST00000454569 CHIAQ9BZP6 476 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 TMEM222Q9H0R3 208 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 NAV3Q8IVL0 2385 aa8.84□□□□□ -0.99
SCN9A-205ENST00000454569 DBX1A6NMT0 343 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 SRRM4A7MD48 611 aaKnown RBP8.83□□□□□ -1
SCN9A-205ENST00000454569 LEUTXA8MZ59 168 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 H0Y980 276 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 SMLR1H3BR10 107 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 J3QLI3 93 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 TIMM23O14925 209 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 CD5LO43866 347 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 EIF4EBP3O60516 100 aaPredicted RBP8.83□□□□□ -1
SCN9A-205ENST00000454569 S1PR2O95136 353 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 LY6G6DO95868 133 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 C1QBP02746 253 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 GAPDHP04406 335 aaKnown RBP8.83□□□□□ -1
SCN9A-205ENST00000454569 GIPP09681 153 aaPredicted RBP8.83□□□□□ -1
SCN9A-205ENST00000454569 NKX2-5P52952 324 aaPredicted RBP8.83□□□□□ -1
SCN9A-205ENST00000454569 LYZL2Q7Z4W2 148 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 MOB3BQ86TA1 216 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 OR5AN1Q8NGI8 311 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 FAM216AQ8WUB2 273 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 RPEQ96AT9 228 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 F8P00451 2351 aa8.83□□□□□ -1
SCN9A-205ENST00000454569 A0A0B4J2A0 478 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 CDS2O95674 445 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 IGKV1-5P01602 117 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 HOXB5P09067 269 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 CNTFRP26992 372 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 S100GP29377 79 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 THBS3P49746 956 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 LGALS4P56470 323 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 RAP2BP61225 183 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 MIDNQ504T8 468 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 GPR157Q5UAW9 335 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 TMEM268Q5VZI3 342 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 SPNS3Q6ZMD2 512 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 NOXA1Q86UR1 476 aa8.82□□□□□ -1
SCN9A-205ENST00000454569 FAM219AQ8IW50 185 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms