RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ABHD17AQ96GS6 310 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 ENSAO43768 121 aaKnown RBP10.03□□□□□ -0.8
SMPD4-213ENST00000454468 CD82P27701 267 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 NUBP1P53384 320 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 ZNF585BQ52M93 769 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 ZNF645Q8N7E2 425 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 FAM216BQ8N7L0 139 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 SNRNP40Q96DI7 357 aaKnown RBP10.03□□□□□ -0.8
SMPD4-213ENST00000454468 ZNRD1Q9P1U0 126 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 TP53TG5Q9Y2B4 290 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 CARHSP1Q9Y2V2 147 aaKnown RBP10.03□□□□□ -0.8
SMPD4-213ENST00000454468 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 TMEM210A6NLX4 147 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 AQP7O14520 342 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 SLC31A2O15432 143 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 OR8U8P0C7N1 319 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 TNFRSF9Q07011 255 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 HMGN3Q15651 99 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 ABHD12Q8N2K0 398 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 CD177Q8N6Q3 437 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 SMIM7Q9BQ49 75 aa10.03□□□□□ -0.8
SMPD4-213ENST00000454468 MARCH11A6NNE9 402 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 TSTD3H0UI37 97 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 IFNA1P01562 189 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 CD5P06127 495 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 SLC25A6P12236 298 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 K7N7A8 449 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 ZNF737O75373 536 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 CD200P41217 278 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 PAX9P55771 341 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 RELQ04864 619 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-213ENST00000454468 MZT1Q08AG7 82 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 P2RY6Q15077 328 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 ZNF474Q6S9Z5 364 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-213ENST00000454468 TGIF2LYQ8IUE0 185 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 OR10G4Q8NGN3 311 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 OR10G9Q8NGN4 311 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 OR10G7Q8NGN6 311 aa10.02□□□□□ -0.81
SMPD4-213ENST00000454468 LINC00473A8K010 186 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 IGHV3-48P01763 117 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 TFF3Q07654 80 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 ZNF880Q6PDB4 577 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 QTRT1Q9BXR0 403 aaKnown RBP10.01□□□□□ -0.81
SMPD4-213ENST00000454468 TOLLIPQ9H0E2 274 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 HIPK2Q9H2X6 1198 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 GCM1Q9NP62 436 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 A0A087X0M5 115 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 A0A1B0GX30 115 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 ZNF146Q15072 292 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 DHRS7BQ6IAN0 325 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-213ENST00000454468 TRAV38-1A0A0B4J264 116 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 HIST1H2BAQ96A08 127 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 ATG101Q9BSB4 218 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 GAB2Q9UQC2 676 aa10.01□□□□□ -0.81
SMPD4-213ENST00000454468 TRGV10A0A0A0MS01 117 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 GCSAMLQ5JQS6 135 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 GATAD1Q8WUU5 269 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 TVP23CQ96ET8 276 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 MRPL37Q9BZE1 423 aaKnown RBP10□□□□□ -0.81
SMPD4-213ENST00000454468 GP6Q9HCN6 339 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 CLN5O75503 358 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 TNFSF13O75888 250 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 CRYABP02511 175 aaKnown RBP10□□□□□ -0.81
SMPD4-213ENST00000454468 FAM87AP0C7U9 286 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 MYOD1P15172 320 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 C1orf185Q5T7R7 199 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 TAF15Q92804 592 aaKnown RBP eCLIP10□□□□□ -0.81
SMPD4-213ENST00000454468 PINX1Q96BK5 328 aaKnown RBP10□□□□□ -0.81
SMPD4-213ENST00000454468 RCC1LQ96I51 464 aaKnown RBP10□□□□□ -0.81
SMPD4-213ENST00000454468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10□□□□□ -0.811e-6■■■■□ 22.5
SMPD4-213ENST00000454468 FAM90A27PA6NNH2 459 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 IGKV3-15P01624 115 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 IGHV2-70P01814 119 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 RAB5AP20339 215 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 PSMB3P49720 205 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 SPCS3P61009 180 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 COMMD1Q8N668 190 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 ARV1Q9H2C2 271 aa10□□□□□ -0.81
SMPD4-213ENST00000454468 LRRC30A6NM36 301 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 PAGE4O60829 102 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 IGHG3P01860 377 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 MRPS11P82912 194 aaKnown RBP9.99□□□□□ -0.81
SMPD4-213ENST00000454468 ZNF525Q8N782 197 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 KIAA1456Q9P272 454 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 PIGBOS1A0A0B4J2F0 54 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 DUXBA0A1W2PPF3 345 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 MT-ND4LP03901 98 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 GZMHP20718 246 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 TAS2R60P59551 318 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 MSMPQ1L6U9 139 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 WDR25Q64LD2 544 aaPredicted RBP9.99□□□□□ -0.81
SMPD4-213ENST00000454468 GCSAMQ8N6F7 178 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 KDF1Q8NAX2 398 aaPredicted RBP9.99□□□□□ -0.81
SMPD4-213ENST00000454468 DKK4Q9UBT3 224 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 TGIF2-C20orf24A0A0A6YYL0 155 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 IGHV3-72A0A0B4J1Y9 119 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 TRAV3A0A0B4J244 114 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 YIF1AO95070 293 aa9.99□□□□□ -0.81
SMPD4-213ENST00000454468 PRR30Q53SZ7 412 aaPredicted RBP9.99□□□□□ -0.81
SMPD4-213ENST00000454468 SLC35E4Q6ICL7 350 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms