RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SRSF12Q8WXF0 261 aaKnown RBP4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TMEM203Q969S6 136 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TMEM80Q96HE8 168 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 UQCC2Q9BRT2 126 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ST6GALNAC5Q9BVH7 336 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LPAR5Q9H1C0 372 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 VCXQ9H320 206 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PLEKHJ1Q9NW61 149 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SDHAF2Q9NX18 166 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF221Q9UK13 617 aa4.5□□□□□ -1.69
HLA-DPA3-207ENST00000454398 IGHV3-35A0A0C4DH35 117 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 A0A0G2JLM5 398 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TMEM213A2RRL7 107 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 HMX3A6NHT5 357 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LINC00473A8K010 186 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF785A8K8V0 405 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 FOXI3A8MTJ6 420 aaPredicted RBP4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TMEM14DPA8MWL7 114 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ATP5HO75947 161 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 S1PR2O95136 353 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 REG1AP05451 166 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SAA1P0DJI8 122 aaPredicted RBP4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 FOLR2P14207 255 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZBTB25P24278 435 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MC5RP33032 325 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 WNT4P56705 351 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TNFRSF9Q07011 255 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 C15orf32Q32M92 178 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MOGAT2Q3SYC2 334 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PLAC9Q5JTB6 97 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZFP1Q6P2D0 407 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF555Q8NEP9 628 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 IL17DQ8TAD2 202 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 DDB2Q92466 427 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CCDC140Q96MF4 163 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GPHA2Q96T91 129 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 OVOL2Q9BRP0 275 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TM2D1Q9BX74 207 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PECRQ9BY49 303 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF430Q9H8G1 570 aaPredicted RBP4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PLGRKTQ9HBL7 147 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 S100A14Q9HCY8 104 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 Q9N2K0 584 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CHCHD3Q9NX63 227 aaKnown RBP4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SLC2A8Q9NY64 477 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SIGLEC8Q9NYZ4 499 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MLXQ9UH92 298 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 UBQLN2Q9UHD9 624 aa4.49□□□□□ -1.69
HLA-DPA3-207ENST00000454398 IGHV3OR16-8A0A075B7F1 116 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 IGKV1D-8A0A087WSZ0 117 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 A0A1B0GW64 132 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SMIM30A4D0T7 59 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MFSD2BA6NFX1 497 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 H3BUA1 57 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RAB27BO00194 218 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 FABP7O15540 132 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 OR2C1O95371 312 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 BPNT1O95861 308 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 FCGR3AP08637 254 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 OR9G9P0C7N8 305 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 AREGP15514 252 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MAPK3P27361 379 aaPredicted RBP4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 MECP2P51608 486 aaKnown RBP4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TAS2R43P59537 309 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RPS25P62851 125 aaKnown RBP4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RCN1Q15293 331 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PRSS8Q16651 343 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RTL8BQ17RB0 113 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 DEFB114Q30KQ6 69 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ACSM3Q53FZ2 586 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 HSD17B12Q53GQ0 312 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LY6G6FQ5SQ64 297 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 C1orf100Q5SVJ3 147 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LIPKQ5VXJ0 399 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 UNQ9165/PRO28630Q6UXU0 137 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LYG2Q86SG7 212 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 BPIFB6Q8NFQ5 453 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 SNAPC3Q92966 411 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 CMSS1Q9BQ75 279 aaKnown RBP4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GGTLC1Q9BX51 225 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 PEMTQ9UBM1 199 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ELF5Q9UKW6 265 aaPredicted RBP4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 KCNK7Q9Y2U2 307 aa4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 AK6Q9Y3D8 172 aaKnown RBP4.48□□□□□ -1.69
HLA-DPA3-207ENST00000454398 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TRBV6-6A0A0A6YYG2 114 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 IRGMA1A4Y4 181 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 ZNF320A2RRD8 509 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 EFCAB10A6NFE3 127 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 FAM223BA6NKX1 122 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TRDCB7Z8K6 153 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TEX22C9J3V5 150 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 E7EUB6 86 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 TUSC2O75896 110 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GSTT2P0CG29 244 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GSTT2BP0CG30 244 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 UBBP0CG47 229 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 GNB3P16520 340 aa4.47□□□□□ -1.69
HLA-DPA3-207ENST00000454398 RPL35AP18077 110 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms