RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 OR6Q1Q8NGQ2 317 aa22.1■■□□□ 1.13
SMARCC1-203ENST00000454240 BORCS5Q969J3 196 aa22.1■■□□□ 1.13
SMARCC1-203ENST00000454240 GPHA2Q96T91 129 aa22.1■■□□□ 1.13
SMARCC1-203ENST00000454240 PLXNB1O43157 2135 aa22.09■■□□□ 1.13
SMARCC1-203ENST00000454240 KCNAB3O43448 404 aa22.09■■□□□ 1.13
SMARCC1-203ENST00000454240 IGLV2-23P01705 113 aa22.09■■□□□ 1.13
SMARCC1-203ENST00000454240 CENPVQ7Z7K6 275 aaPredicted RBP22.09■■□□□ 1.13
SMARCC1-203ENST00000454240 FOXRED2Q8IWF2 684 aa22.09■■□□□ 1.13
SMARCC1-203ENST00000454240 ARRDC1Q8N5I2 433 aa22.09■■□□□ 1.13
SMARCC1-203ENST00000454240 SRRM4A7MD48 611 aaKnown RBP22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 TNFSF12O43508 249 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 FCGR3BO75015 233 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 IFNA6P05013 189 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 CSF1P09603 554 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 PTBP1P26599 531 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 ETV6P41212 452 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 BRWD1-AS2P59051 145 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 AADACL3Q5VUY0 350 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 STEAP1BQ6NZ63 245 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 OR4D10Q8NGI6 311 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 TCTEX1D2Q8WW35 142 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 HARBI1Q96MB7 349 aa22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 NOL4LQ96MY1 436 aaPredicted RBP22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 METTL1Q9UBP6 276 aaKnown RBP22.08■■□□□ 1.13
SMARCC1-203ENST00000454240 AP4M1O00189 453 aa22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 SHOXO15266 292 aa22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 RAB3DO95716 219 aa22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 CRYZL1O95825 349 aa22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 UCP3P55916 312 aa22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 ZNF79Q15937 498 aa22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 LHFPL1Q86WI0 220 aa22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 OSR1Q8TAX0 266 aaPredicted RBP22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 CHPT1Q8WUD6 406 aa22.07■■□□□ 1.12
SMARCC1-203ENST00000454240 TET2Q6N021 2002 aaPredicted RBP22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 IGHV7-81A0A0B4J1V7 117 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 FCN1O00602 326 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 SLC25A17O43808 307 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 CRYGBP07316 175 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 PLGLAQ15195 96 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 OR2B11Q5JQS5 317 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 LPCAT3Q6P1A2 487 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 STPG2Q8N412 459 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 OR5AU1Q8NGC0 362 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 LINC00527Q9UJ94 153 aa22.06■■□□□ 1.12
SMARCC1-203ENST00000454240 ANKRD20A5PA0PJZ0 165 aa22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 IGF1P05019 195 aa22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 CD28P10747 220 aa22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 PYDC2Q56P42 97 aa22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 C11orf44Q8N8P7 122 aa22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 THAP7Q9BT49 309 aaPredicted RBP22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 RSRP1Q9BUV0 290 aa22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 OR51J1Q9H342 316 aa22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 ZNF580Q9UK33 172 aa22.05■■□□□ 1.12
SMARCC1-203ENST00000454240 GPR31O00270 319 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 FBXO24O75426 580 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 PGLYRP1O75594 196 aaPredicted RBP22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 ZNF735P0CB33 412 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 KIR2DS2P43631 304 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 CATR1Q13166 79 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 MEF2DQ14814 521 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 SPANXN2Q5MJ10 180 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 C10orf99Q6UWK7 81 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 OR4S2Q8NH73 311 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 TPSG1Q9NRR2 321 aa22.04■■□□□ 1.12
SMARCC1-203ENST00000454240 PSMB11A5LHX3 300 aa22.03■■□□□ 1.12
SMARCC1-203ENST00000454240 AKAIN1P0CW23 69 aa22.03■■□□□ 1.12
SMARCC1-203ENST00000454240 CX3CL1P78423 397 aa22.03■■□□□ 1.12
SMARCC1-203ENST00000454240 CMTM1Q8IZ96 169 aa22.03■■□□□ 1.12
SMARCC1-203ENST00000454240 UBE2KP61086 200 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 HIST2H2BDQ6DRA6 164 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 ZNF562Q6V9R5 426 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 PPP1R27Q86WC6 154 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 SLC38A6Q8IZM9 456 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 Q8N402 240 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 TEX45Q8NA69 505 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 OR4C16Q8NGL9 310 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 TERB2Q8NHR7 220 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 CLCC1Q96S66 551 aa22.02■■□□□ 1.12
SMARCC1-203ENST00000454240 RBFOX2O43251 390 aaKnown RBP eCLIP22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 RAMP3O60896 148 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 VMA21Q3ZAQ7 101 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 TCTEX1D4Q5JR98 221 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 FAAP20Q6NZ36 180 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 ZNF329Q86UD4 541 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 SPAG16Q8N0X2 631 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 OR51H1Q8NH63 302 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 SGMS2Q8NHU3 365 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 TRIM63Q969Q1 353 aa22.01■■□□□ 1.11
SMARCC1-203ENST00000454240 TRRAPQ9Y4A5 3859 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 ATP6V0E1O15342 81 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 CA2P00918 260 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 RLN1P04808 185 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 NDPQ00604 133 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 CD83Q01151 205 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 MRGPRG-AS1Q2M3A8 158 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 GON7Q9BXV9 100 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 SRRQ9GZT4 340 aa22■■□□□ 1.11
SMARCC1-203ENST00000454240 CRIP2P52943 208 aaPredicted RBP21.99■■□□□ 1.11
SMARCC1-203ENST00000454240 SLC35B1P78383 322 aa21.99■■□□□ 1.11
SMARCC1-203ENST00000454240 CFHR3Q02985 330 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms