RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 FOXA2Q9Y261 457 aaPredicted RBP11.32□□□□□ -0.6
HSPG2-207ENST00000453796 XRCC3O43542 346 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 SMIM18P0DKX4 95 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 TMEM267Q0VDI3 215 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-207ENST00000453796 PJVKQ0ZLH3 352 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-207ENST00000453796 TMEM65Q6PI78 240 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 LFNGQ8NES3 379 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 BEST4Q8NFU0 473 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 OR13F1Q8NGS4 319 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 ARPC1AQ92747 370 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 SLC25A46Q96AG3 418 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 MCRIP2Q9BUT9 160 aaKnown RBP11.31□□□□□ -0.6
HSPG2-207ENST00000453796 GPR61Q9BZJ8 451 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 VSIG4Q9Y279 399 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 A3GALT2U3KPV4 340 aa11.31□□□□□ -0.6
HSPG2-207ENST00000453796 J3QRK9 145 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 SHOXO15266 292 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 SLC22A5O76082 557 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-207ENST00000453796 NCS1P62166 190 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 GNB1P62873 340 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 RPL30P62888 115 aaKnown RBP11.3□□□□□ -0.6
HSPG2-207ENST00000453796 FXYD3Q14802 87 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 RTL8BQ17RB0 113 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 UBE2NLQ5JXB2 153 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 UNQ5815/PRO19632Q6UWF5 114 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 OVCH2Q7RTZ1 564 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 OR11H1Q8NG94 326 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 OR5M8Q8NGP6 311 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 CASTOR1Q8WTX7 329 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 SNAPC3Q92966 411 aa11.3□□□□□ -0.6
HSPG2-207ENST00000453796 RBMX2Q9Y388 322 aaKnown RBP11.3□□□□□ -0.6
HSPG2-207ENST00000453796 K7EIL1 84 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 CRYZL1O95825 349 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 VBP1P61758 197 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 CBX3Q13185 183 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 ACTBL2Q562R1 376 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 PYHIN1Q6K0P9 492 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 TEX45Q8NA69 505 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 OSR1Q8TAX0 266 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-207ENST00000453796 ABHD5Q8WTS1 349 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 KCTD12Q96CX2 325 aaKnown RBP11.29□□□□□ -0.6
HSPG2-207ENST00000453796 ANAPC10Q9UM13 185 aa11.29□□□□□ -0.6
HSPG2-207ENST00000453796 CBX5P45973 191 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 RAB25P57735 213 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 BRWD1-AS2P59051 145 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 ARPC4P59998 168 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 UBE2KP61086 200 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 KCTD9Q7L273 389 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 SAMD12Q8N8I0 201 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 GRPEL2Q8TAA5 225 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 S100A16Q96FQ6 103 aaKnown RBP11.28□□□□□ -0.6
HSPG2-207ENST00000453796 OR5B12Q96R08 314 aa11.28□□□□□ -0.6
HSPG2-207ENST00000453796 WI2-2373I1.2A0A1W2PRP0 233 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 MEIS3P1A6NDR6 274 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 FCGR3BO75015 233 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 AADACP22760 399 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 FCGR2CP31995 323 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 TAS2R20P59543 309 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 ZNF616Q08AN1 781 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 MSMO1Q15800 293 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 VMA21Q3ZAQ7 101 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 OR5AP2Q8NGF4 316 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 OR1N2Q8NGR9 330 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 RHOVQ96L33 236 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 HSD17B10Q99714 261 aaKnown RBP11.27□□□□□ -0.61
HSPG2-207ENST00000453796 NAA50Q9GZZ1 169 aaKnown RBP11.27□□□□□ -0.61
HSPG2-207ENST00000453796 ALX4Q9H161 411 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-207ENST00000453796 SLA2Q9H6Q3 261 aa11.27□□□□□ -0.61
HSPG2-207ENST00000453796 H3BUA1 57 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 GABARAPO95166 117 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 CNIH1O95406 144 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 PPYP01298 95 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 EIF4EP06730 217 aaKnown RBP11.26□□□□□ -0.61
HSPG2-207ENST00000453796 FCER2P06734 321 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
HSPG2-207ENST00000453796 OR8U8P0C7N1 319 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 SAA1P0DJI8 122 aaPredicted RBP11.26□□□□□ -0.61
HSPG2-207ENST00000453796 NAT1P18440 290 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 CTF1Q16619 201 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 PRSS8Q16651 343 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 TMEM69Q5SWH9 247 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 C9orf66Q5T8R8 295 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 IDO2Q6ZQW0 420 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 ANKRD13BQ86YJ7 626 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 MFSD4AQ8N468 514 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 GIMAP1Q8WWP7 306 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 DPF1Q92782 380 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 TMEM68Q96MH6 324 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 MS4A10Q96PG2 267 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 CCL28Q9NRJ3 127 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 SCOCQ9UIL1 159 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
HSPG2-207ENST00000453796 BRI3O95415 125 aa11.25□□□□□ -0.61
HSPG2-207ENST00000453796 TPPP2P59282 170 aa11.25□□□□□ -0.61
HSPG2-207ENST00000453796 CDK10Q15131 360 aa11.25□□□□□ -0.61
HSPG2-207ENST00000453796 OR2B11Q5JQS5 317 aa11.25□□□□□ -0.61
HSPG2-207ENST00000453796 ZNF66Q6ZN08 573 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms