RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 OR11H7Q8NGC8 314 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 LHFPL5Q8TAF8 219 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 ASB13Q8WXK3 278 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RRNAD1Q96FB5 475 aaKnown RBP10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 WASHC3Q9Y3C0 194 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 HILPDAQ9Y5L2 63 aa10.14□□□□□ -0.79
HLA-DPA1-244ENST00000453337 ITPR3Q14573 2671 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 C13orf42A0A1B0GVH6 325 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 H0YJW9 148 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RAMP3O60896 148 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CXCL3P19876 107 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CD1BP29016 333 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SAA4P35542 130 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 ERVK-16P61578 105 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 C2orf68Q2NKX9 166 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 GGNBP1Q5YKI7 109 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 LHFPL4Q7Z7J7 247 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FAM219AQ8IW50 185 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SLC35G3Q8N808 338 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 OR4C13Q8NGP0 309 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RNASE11Q8TAA1 199 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 OSR1Q8TAX0 266 aaPredicted RBP10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 NANPQ8TBE9 248 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 LSM10Q969L4 123 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FLYWCH2Q96CP2 140 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 C2orf50Q96LR7 162 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SPIN2AQ99865 258 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RNF5Q99942 180 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SPIN2BQ9BPZ2 258 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 ZNF436Q9C0F3 470 aaPredicted RBP10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 COMMD9Q9P000 198 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CSPG4Q6UVK1 2322 aa10.13□□□□□ -0.79
HLA-DPA1-244ENST00000453337 NBPF19A0A087WUL8 3843 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 TRAV40A0A0B4J280 105 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 A8MV72 311 aaPredicted RBP10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FAM25EA8MYX2 175 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 ADAP1O75689 374 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 OR2A4O95047 310 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CRYZL1O95825 349 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 KRASP01116 189 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 AVPP01185 164 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 IGKV1-39P01597 117 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 IGKV1D-39P04432 117 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 GIPP09681 153 aaPredicted RBP10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SLC25A6P12236 298 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 NQO2P16083 231 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 BRS3P32247 399 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 LGALS7P47929 136 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 AKR1C2P52895 323 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CD83Q01151 205 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 LDLRAD2Q5SZI1 272 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 OR5M8Q8NGP6 311 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 R3HDM4Q96D70 268 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 OR2A7Q96R45 310 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 NEURL2Q9BR09 285 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 PDCD10Q9BUL8 212 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 MMP24Q9Y5R2 645 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
HLA-DPA1-244ENST00000453337 TEX15Q9BXT5 2789 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 BAHCC1Q9P281 2608 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 NOTCH2Q04721 2471 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 A0A1B0GU03 582 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 A0A1W2PPI3 338 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CCSO14618 274 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SHOXO15266 292 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 S1PR2O95136 353 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SIX6O95475 246 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RAP2BP61225 183 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RPS16P62249 146 aaKnown RBP10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SRSF4Q08170 494 aaKnown RBP10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 HABP2Q14520 560 aaPredicted RBP10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 TMEM177Q53S58 311 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 H2BFWTQ7Z2G1 175 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 DMBX1Q8NFW5 382 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SEC22AQ96IW7 307 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CHIAQ9BZP6 476 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 MEGF9Q9H1U4 602 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 NUP50Q9UKX7 468 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FAM96BQ9Y3D0 163 aa10.11□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FAM90A9PA6NNJ1 464 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 TIMM23O14925 209 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CD5LO43866 347 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 IGHV4-38-2P0DP08 117 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 G6PCP35575 357 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 H2BFSP57053 126 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 POU2AF1Q16633 256 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 IAH1Q2TAA2 248 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 NMSQ5H8A3 153 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 KLF17Q5JT82 389 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 THOC7Q6I9Y2 204 aaKnown RBP10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 THNSL2Q86YJ6 484 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 PPP1R14BQ96C90 147 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 GPR146Q96CH1 333 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 AJUBAQ96IF1 538 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 ST6GAL2Q96JF0 529 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 OR10C1Q96KK4 312 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RHOVQ96L33 236 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 TSNAXQ99598 290 aaKnown RBP10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 NMES1Q9C002 83 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 MS4A7Q9GZW8 240 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms