RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 HACD4Q5VWC8 232 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 SFXN4Q6P4A7 337 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 BVESQ8NE79 360 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 LGALS14Q8TCE9 139 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 RHOVQ96L33 236 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 MS4A10Q96PG2 267 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 CENPOQ9BU64 300 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 OR51E2Q9H255 320 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 DAPK2Q9UIK4 370 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 SSR3Q9UNL2 185 aa9.62□□□□□ -0.87
CPSF4-208ENST00000452047 ZNF256Q9Y2P7 627 aaPredicted RBP9.62□□□□□ -0.87
CPSF4-208ENST00000452047 TMEM235A6NFC5 223 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 SHOXO15266 292 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 RRASP10301 218 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 SDC2P34741 201 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 RTL8BQ17RB0 113 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 ZNF429Q86V71 674 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 POC5Q8NA72 575 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 NUDCD2Q8WVJ2 157 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 ADTRPQ96IZ2 230 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 DCSTAMPQ9H295 470 aa9.61□□□□□ -0.87
CPSF4-208ENST00000452047 RBM7Q9Y580 266 aaKnown RBP9.61□□□□□ -0.87
CPSF4-208ENST00000452047 H3BUA1 57 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 SSX5O60225 188 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 SCGNO76038 276 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 CNIH1O95406 144 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 TRGV3P03979 118 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 HSPB1P04792 205 aaKnown RBP9.6□□□□□ -0.87
CPSF4-208ENST00000452047 CD40LGP29965 261 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 CBX3Q13185 183 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 ZNF645Q8N7E2 425 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 SLC25A38Q96DW6 304 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 ST6GALNAC5Q9BVH7 336 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 RNF167Q9H6Y7 350 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 RHBDL2Q9NX52 303 aa9.6□□□□□ -0.87
CPSF4-208ENST00000452047 SAP30O75446 220 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 BRI3O95415 125 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 CRYZL1O95825 349 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 IGLV2-14P01704 120 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 HLA-DQB1P01920 261 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 CTXN2P0C2S0 81 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 CLEC2LP0C7M8 214 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 NFYAP23511 347 aaPredicted RBP9.59□□□□□ -0.87
CPSF4-208ENST00000452047 SCAND1P57086 179 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 UBE2KP61086 200 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 PITPNAQ00169 270 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 KCTD21Q4G0X4 260 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 TEX45Q8NA69 505 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 OR5T1Q8NG75 326 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 OSR1Q8TAX0 266 aaPredicted RBP9.59□□□□□ -0.87
CPSF4-208ENST00000452047 TMEM68Q96MH6 324 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 OR2W1Q9Y3N9 320 aa9.59□□□□□ -0.87
CPSF4-208ENST00000452047 IGKV1D-13A0A0B4J2D9 117 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-208ENST00000452047 IGKV1-13P0DP09 117 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 GNG2P59768 71 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 MXD1Q05195 221 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 EIF4EBP1Q13541 118 aaPredicted RBP9.58□□□□□ -0.88
CPSF4-208ENST00000452047 PRSS8Q16651 343 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 VMA21Q3ZAQ7 101 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 CNIH2Q6PI25 160 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 IDO2Q6ZQW0 420 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 OVCH2Q7RTZ1 564 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 OR5H6Q8NGV6 325 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 ZNF355PQ9NSJ1 428 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 ANXA10Q9UJ72 324 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 RBMX2Q9Y388 322 aaKnown RBP9.58□□□□□ -0.88
CPSF4-208ENST00000452047 ETV7Q9Y603 341 aa9.58□□□□□ -0.88
CPSF4-208ENST00000452047 HUWE1Q7Z6Z7 4374 aaKnown RBP9.57□□□□□ -0.88
CPSF4-208ENST00000452047 A0A0G2JLM5 398 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 LOC100506127A0A0U1RQW1 187 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 J3QRK9 145 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 RBMXL2O75526 392 aaKnown RBP9.57□□□□□ -0.88
CPSF4-208ENST00000452047 TUSC2O75896 110 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 LY86O95711 162 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 SAA1P0DJI8 122 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-208ENST00000452047 SPNP16150 400 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 CD36P16671 472 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 RPL30P62888 115 aaKnown RBP9.57□□□□□ -0.88
CPSF4-208ENST00000452047 DEFA5Q01523 94 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 NEDD8Q15843 81 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 KCTD9Q7L273 389 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 ADAD2Q8NCV1 583 aaKnown RBP9.57□□□□□ -0.88
CPSF4-208ENST00000452047 SRSF12Q8WXF0 261 aaKnown RBP9.57□□□□□ -0.88
CPSF4-208ENST00000452047 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 TINAGL1Q9GZM7 467 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-208ENST00000452047 RANGRFQ9HD47 186 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-208ENST00000452047 SMAD5-AS1Q9Y6J3 95 aa9.57□□□□□ -0.88
CPSF4-208ENST00000452047 C13orf42A0A1B0GVH6 325 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 DPPA5A6NC42 116 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 MSGN1A6NI15 193 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 FCGR3BO75015 233 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 SLC22A5O76082 557 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 APELAP0DMC3 54 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 GP9P14770 177 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 ZP3P21754 424 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 AADACP22760 399 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 BRWD1-AS2P59051 145 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 DYRK1AQ13627 763 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms