RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 KCNS1Q96KK3 526 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR8B2Q96RD0 313 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 PMCHL2Q9BQD1 86 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 PIMREGQ9BSJ6 248 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 NUDT9Q9BW91 350 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 SFXN3Q9BWM7 321 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 VN1R1Q9GZP7 353 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 PARP12Q9H0J9 701 aaKnown RBP3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 NXF5Q9H1B4 397 aaKnown RBP3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 SH3BGRL3Q9H299 93 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 LYRM4Q9HD34 91 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 RAB9BQ9NP90 201 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 NRN1Q9NPD7 142 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 PNRC2Q9NPJ4 139 aaKnown RBP3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 TAAR3PQ9P1P4 343 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 ONECUT1Q9UBC0 465 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 TRMT112Q9UI30 125 aaKnown RBP3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 KCNS2Q9ULS6 477 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 WNT6Q9Y6F9 365 aa3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 TNS1Q9HBL0 1735 aaKnown RBP3.02□□□□□ -1.93
HMGB3P8-201ENST00000449709 KIAA2026Q5HYC2 2103 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 TRAV18A0A075B6X5 111 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 LOC102724200A0A096LPH7 203 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 A0A1B0GUS0 222 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 A0A1B0GX51 115 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 C17orf102A2RUQ5 167 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 C7orf71A4D174 169 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 MBLAC1A4D2B0 266 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 FAM231BA6NCW3 169 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 FAM90A26D6RGX4 464 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 HSPB6O14558 160 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 SH2D1BO14796 132 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 ZNF207O43670 478 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 LDB3O75112 727 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 ZNF324O75467 553 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 UPK3AO75631 287 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 LYPD3O95274 346 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 CNIH1O95406 144 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 CPSF4O95639 269 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 CLDN1O95832 211 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 CA2P00918 260 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 HIST1H1DP16402 221 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 CEBPBP17676 345 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 IGFBP3P17936 291 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 FBLP22087 321 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 NPY1RP25929 384 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 TIA1P31483 386 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 KIR2DS4P43632 304 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR3A4PP47883 348 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 ASCL1P50553 236 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 UCNP55089 124 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR1D5P58170 312 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 NANOS3P60323 173 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 RPL24P83731 157 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 SP4Q02446 784 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 FMODQ06828 376 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 TRIP6Q15654 476 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 ADIRFQ15847 76 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 LRRC75BQ2VPJ9 315 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 KIAA1644Q3SXP7 199 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 PRR30Q53SZ7 412 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 FFAR4Q5NUL3 377 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 TIMM23BQ5SRD1 257 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 C1orf100Q5SVJ3 147 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 DCAF12Q5T6F0 453 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 ASPHD2Q6ICH7 369 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 KCNIP4Q6PIL6 250 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 C2orf91Q6ZV80 131 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 CPEB2Q7Z5Q1 589 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 ZNF584Q8IVC4 421 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 SCCPDHQ8NBX0 429 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR51T1Q8NGJ9 327 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR2G3Q8NGZ4 309 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 PPTC7Q8NI37 304 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 VSTM2AQ8TAG5 236 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 FAM213BQ8TBF2 198 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR51E1Q8TCB6 317 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 DAZLQ92904 295 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 RAB8BQ92930 207 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 RERGQ96A58 199 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 ZNF503Q96F45 646 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 SCGB3A2Q96PL1 93 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 GPER1Q99527 375 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 LMF2Q9BU23 707 aaKnown RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 GGTLC1Q9BX51 225 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 COA1Q9GZY4 146 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 TMEM126AQ9H061 195 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR2D2Q9H210 308 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 MS4A6AQ9H2W1 248 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 IFI27L2Q9H2X8 130 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR51I2Q9H344 312 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 PPDPFQ9H3Y8 114 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 AKIRIN1Q9H9L7 192 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 SCRT2Q9NQ03 307 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 RPRMQ9NS64 109 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 NECAP2Q9NVZ3 263 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 KCNIP1Q9NZI2 227 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 OR1A1Q9P1Q5 309 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 CLCF1Q9UBD9 225 aa3.01□□□□□ -1.93
HMGB3P8-201ENST00000449709 PRO0461Q9UI25 63 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms