RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TMUB1Q9BVT8 246 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 MS4A7Q9GZW8 240 aaPredicted RBP11.8□□□□□ -0.52
TNF-208ENST00000449264 HIVEP2P31629 2446 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 MXRA5Q9NR99 2828 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 LY6G6DO95868 133 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 FSHBP01225 129 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 IGKV1-16P04430 117 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 RPA2P15927 270 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 LPAR6P43657 344 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 RAB13P51153 203 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 ARHGDIBP52566 201 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 SRPXP78539 464 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 ZNF585BQ52M93 769 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 ZNF695Q8IW36 515 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 LGI3Q8N145 548 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 TCTEX1D1Q8N7M0 179 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 CD300LFQ8TDQ1 290 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 WASHC3Q9Y3C0 194 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 F8P00451 2351 aa11.79□□□□□ -0.52
TNF-208ENST00000449264 CD24P25063 80 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 SRP14P37108 136 aaKnown RBP11.78□□□□□ -0.52
TNF-208ENST00000449264 PDPNQ86YL7 162 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 BCL6BQ8N143 479 aaPredicted RBP11.78□□□□□ -0.52
TNF-208ENST00000449264 RNASE11Q8TAA1 199 aaKnown RBP11.78□□□□□ -0.52
TNF-208ENST00000449264 CFHR4Q92496 578 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 MED28Q9H204 178 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 MAST4O15021 2626 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 MDFIC2A0A1B0GVS7 189 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 CCSO14618 274 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 RBFOX2O43251 390 aaKnown RBP eCLIP11.78□□□□□ -0.52
TNF-208ENST00000449264 CDS2O95674 445 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 IGKV1-39P01597 117 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 IGKV1D-39P04432 117 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 HOXB5P09067 269 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 FBP1P09467 338 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 MC5RP33032 325 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 AKR1C2P52895 323 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 TAGLNQ01995 201 aaKnown RBP11.78□□□□□ -0.52
TNF-208ENST00000449264 HES1Q14469 280 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
TNF-208ENST00000449264 CADM3Q8N126 398 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 TEX29Q8N6K0 151 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 SLC35G3Q8N808 338 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 RBPMSQ93062 196 aaKnown RBP11.78□□□□□ -0.52
TNF-208ENST00000449264 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
TNF-208ENST00000449264 GOSR2O14653 212 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 ADAP1O75689 374 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 VENTXO95231 258 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 HPRT1P00492 218 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 IGKV1D-33P01593 117 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 IGKV1-33P01594 117 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 RRASP10301 218 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 HNF1AP20823 631 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 BPIFB3P59826 476 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 DHRS7BQ6IAN0 325 aaPredicted RBP11.77□□□□□ -0.53
TNF-208ENST00000449264 CLEC9AQ6UXN8 241 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 SSX9Q7RTT3 188 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 LYZL2Q7Z4W2 148 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 FLYWCH2Q96CP2 140 aaKnown RBP11.77□□□□□ -0.53
TNF-208ENST00000449264 HARBI1Q96MB7 349 aa11.77□□□□□ -0.53
TNF-208ENST00000449264 ANK3Q12955 4377 aaKnown RBP11.77□□□□□ -0.53
TNF-208ENST00000449264 A0A0B4J2A0 478 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 FAM25EA8MYX2 175 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 SHOXO15266 292 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 KRASP01116 189 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 SNRNP70P08621 437 aaKnown RBP11.76□□□□□ -0.53
TNF-208ENST00000449264 BRS3P32247 399 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 G6PCP35575 357 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 RRAS2P62070 204 aaPredicted RBP11.76□□□□□ -0.53
TNF-208ENST00000449264 HNF4GQ14541 408 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 FCN2Q15485 313 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 C2orf68Q2NKX9 166 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
TNF-208ENST00000449264 VKORC1L1Q8N0U8 176 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 OR4C13Q8NGP0 309 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 R3HDM4Q96D70 268 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 PLEKHA2Q9HB19 425 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
TNF-208ENST00000449264 MGAT4CQ9UBM8 478 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 SHPKQ9UHJ6 478 aa11.76□□□□□ -0.53
TNF-208ENST00000449264 MARCH11A6NNE9 402 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 FOSL1P15407 271 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 CD1BP29016 333 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 ERVK-16P61578 105 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 RPS16P62249 146 aaKnown RBP11.75□□□□□ -0.53
TNF-208ENST00000449264 HABP2Q14520 560 aaPredicted RBP11.75□□□□□ -0.53
TNF-208ENST00000449264 DEFB112Q30KQ8 113 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 FBLN7Q53RD9 439 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 LRTM2Q8N967 370 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 COMMD9Q9P000 198 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 NSD1Q96L73 2696 aaPredicted RBP11.75□□□□□ -0.53
TNF-208ENST00000449264 DBX1A6NMT0 343 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 SIX6O95475 246 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 IGKV1-5P01602 117 aa11.75□□□□□ -0.53
TNF-208ENST00000449264 NQO2P16083 231 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms