RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	SPINK9	Q5DT21	86 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	CYP2G1P	Q6ZSU1	146 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	C1orf87	Q8N0U7	546 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	GCSAM	Q8N6F7	178 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	FAM210B	Q96KR6	192 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	ACTR3C	Q9C0K3	210 aa	Predicted RBP	14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	NIT2	Q9NQR4	276 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	NAT8	Q9UHE5	227 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	TMEM250	H0YL14	139 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	GALR2	O43603	387 aa	Predicted RBP	14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	YPEL1	O60688	119 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BK	O60814	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	YIF1A	O95070	293 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BJ	P06899	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BO	P23527	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BB	P33778	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	CDX1	P47902	265 aa	Predicted RBP	14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	PSMB3	P49720	205 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BD	P58876	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	RPS16	P62249	146 aa	Known RBP	14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BC	P62807	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST2H2BE	Q16778	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BH	Q93079	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	YPEL2	Q96QA6	119 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BN	Q99877	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HIST1H2BM	Q99879	126 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	SMIM7	Q9BQ49	75 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HCFC1	P51610	2035 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	IFITM10	A6NMD0	228 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HMGB3	O15347	200 aa	Known RBP	14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	KBTBD11	O94819	623 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	HPRT1	P00492	218 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	IGHV3-13	P01766	116 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	NDUFA6	P56556	154 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	LOXL3	P58215	753 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058		Q8N7P7	452 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	PPP1R35	Q8TAP8	253 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	SSX3	Q99909	188 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	MANBAL	Q9NQG1	85 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	OR6C3	Q9NZP0	311 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	GNG12	Q9UBI6	72 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	DUSP13	Q9UII6	198 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	LOC400499	M0QZD8	3231 aa		14.05	□□□□□ -0.16
TOM1-210	ENST00000449058	TRBV24-1	A0A075B6N3	115 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	F2RL2	O00254	374 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	FCGR3B	O75015	233 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	LY86	O95711	162 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	TRGC2	P03986	189 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	ZNF83	P51522	516 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	ZNF709	Q8N972	641 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	RAB24	Q969Q5	203 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	DIRC2	Q96SL1	478 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	GSN-AS1	Q9NRJ2	163 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	RBFOX2	O43251	390 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	TGOLN2	O43493	480 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	OPN1MW	P04001	364 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	OPN1MW2	P0DN77	364 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	OPN1MW3	P0DN78	364 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	TMEM241	Q24JQ0	296 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	SPRN	Q5BIV9	151 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058		Q8TCH9	128 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	WDR83OS	Q9Y284	106 aa		14.04	□□□□□ -0.16
TOM1-210	ENST00000449058	DSP	P15924	2871 aa	Known RBP	14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	C17orf112	F2Z3M2	114 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	FABP1	P07148	127 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	TIMM23B	Q5SRD1	257 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	ZADH2	Q8N4Q0	377 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	MEGF10	Q96KG7	1140 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	OR2V2	Q96R30	315 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	OTOGL	Q3ZCN5	2332 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	IGHV3OR15-7	A0A075B7D8	119 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058		M0R1X1	148 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	LHB	P01229	141 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	SPCS3	P61009	180 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	PDLIM3	Q53GG5	364 aa	Predicted RBP	14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	ZNF474	Q6S9Z5	364 aa	Predicted RBP	14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	SPNS3	Q6ZMD2	512 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	GATAD1	Q8WUU5	269 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	S100PBP	Q96BU1	408 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	PLPPR2	Q96GM1	343 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	IFI27L2	Q9H2X8	130 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	OR51M1	Q9H341	326 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	TTC28	Q96AY4	2481 aa		14.03	□□□□□ -0.16
TOM1-210	ENST00000449058	CGB3	P0DN86	165 aa		14.02	□□□□□ -0.16
TOM1-210	ENST00000449058	CGB7	P0DN87	165 aa		14.02	□□□□□ -0.16
TOM1-210	ENST00000449058	ZNF134	P52741	427 aa		14.02	□□□□□ -0.16
TOM1-210	ENST00000449058	NKX6-1	P78426	367 aa	Predicted RBP	14.02	□□□□□ -0.16
TOM1-210	ENST00000449058	MOGAT3	Q86VF5	341 aa		14.02	□□□□□ -0.16
TOM1-210	ENST00000449058	ZNRF1	Q8ND25	227 aa		14.02	□□□□□ -0.16
TOM1-210	ENST00000449058	OR52E5	Q8NH55	327 aa		14.02	□□□□□ -0.16
TOM1-210	ENST00000449058		M0R1B8	84 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	PHOX2A	O14813	284 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	GLRX	P35754	106 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	ADIRF	Q15847	76 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	C3orf36	Q3SXR2	165 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	RPL39P5	Q59GN2	51 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	PRAMEF5	Q5TYX0	476 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	ABHD5	Q8WTS1	349 aa		14.02	□□□□□ -0.17
TOM1-210	ENST00000449058	NCOR1P1	Q9H4R4	102 aa		14.02	□□□□□ -0.17

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