RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 IER2Q9BTL4 223 aa11.4□□□□□ -0.59
POLR1B-209ENST00000448770 QTRT1Q9BXR0 403 aaKnown RBP11.4□□□□□ -0.59
POLR1B-209ENST00000448770 ACTR3CQ9C0K3 210 aaPredicted RBP11.4□□□□□ -0.59
POLR1B-209ENST00000448770 MANBALQ9NQG1 85 aa11.4□□□□□ -0.59
POLR1B-209ENST00000448770 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.4□□□□□ -0.59
POLR1B-209ENST00000448770 OR6C3Q9NZP0 311 aa11.4□□□□□ -0.59
POLR1B-209ENST00000448770 TRBV20OR9-2A0A075B6H5 130 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 TMEM30CPA0ZSE6 113 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 RNF212BA8MTL3 300 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 C11orf94C9JXX5 98 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 NUPR1O60356 82 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 LYZL6O75951 148 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 CD82P27701 267 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 ATP1A1-AS1Q5TC04 95 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 LINC01551Q86U37 167 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 OR2T10Q8NGZ9 312 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 OR5B12Q96R08 314 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 CFAP47Q6ZTR5 3102 aa11.39□□□□□ -0.59
POLR1B-209ENST00000448770 CLDN14O95500 239 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 SP1P08047 785 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 COX5AP20674 150 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 IGHV1-2P23083 117 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 Q3ZCU0 254 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 FAM78BQ5VT40 261 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 GCNT2Q8N0V5 402 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 MDS2Q8NDY4 140 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 TMEM204Q9BSN7 226 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 TECTAO75443 2155 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 ZNF705GA8MUZ8 300 aaPredicted RBP11.38□□□□□ -0.59
POLR1B-209ENST00000448770 EREGO14944 169 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 SLC31A2O15432 143 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 RBFOX2O43251 390 aaKnown RBP eCLIP11.38□□□□□ -0.59
POLR1B-209ENST00000448770 IFNA10P01566 189 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 TYMSP04818 313 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 CDC34P49427 236 aaPredicted RBP11.38□□□□□ -0.59
POLR1B-209ENST00000448770 RPL15P61313 204 aaKnown RBP11.38□□□□□ -0.59
POLR1B-209ENST00000448770 MSMO1Q15800 293 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 ATP6V1FQ16864 119 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 FZR1Q9UM11 496 aa11.38□□□□□ -0.59
POLR1B-209ENST00000448770 IQCF6A8MYZ5 107 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 RAB29O14966 203 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 RAC2P15153 192 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 GABRA2P47869 451 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 LTC4SQ16873 150 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 UTF1Q5T230 341 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 PATZ1Q9HBE1 687 aaKnown RBP11.37□□□□□ -0.59
POLR1B-209ENST00000448770 WASF3Q9UPY6 502 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 MARCH11A6NNE9 402 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 RRHO14718 337 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 EDDM3BP56851 147 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 FOXF2Q12947 444 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 TRIP6Q15654 476 aaKnown RBP11.37□□□□□ -0.59
POLR1B-209ENST00000448770 TCF23Q7RTU1 214 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 H2BFWTQ7Z2G1 175 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 TMEM256Q8N2U0 113 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 KLF14Q8TD94 323 aaPredicted RBP11.37□□□□□ -0.59
POLR1B-209ENST00000448770 RYDENQ9NUL5 291 aaKnown RBP11.37□□□□□ -0.59
POLR1B-209ENST00000448770 KCNIP1Q9NZI2 227 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 PSG11Q9UQ72 335 aa11.37□□□□□ -0.59
POLR1B-209ENST00000448770 TET2Q6N021 2002 aaPredicted RBP11.37□□□□□ -0.59
POLR1B-209ENST00000448770 RBMXL2O75526 392 aaKnown RBP11.36□□□□□ -0.59
POLR1B-209ENST00000448770 AGFG2O95081 481 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 NDUFB4O95168 129 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 SLC35E4Q6ICL7 350 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 FIP1L1Q6UN15 594 aaKnown RBP11.36□□□□□ -0.59
POLR1B-209ENST00000448770 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 ZBTB34Q8NCN2 500 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 NANOS1Q8WY41 292 aaKnown RBP11.36□□□□□ -0.59
POLR1B-209ENST00000448770 ANAPC16Q96DE5 110 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 OOEPA6NGQ2 149 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 LAMTOR5O43504 91 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 MBP02144 154 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 TAS2R60P59551 318 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 ACP7Q6ZNF0 438 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 DBX2Q6ZNG2 339 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 C1orf159Q96HA4 380 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 ACY3Q96HD9 319 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 DIRC2Q96SL1 478 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 OBP2BQ9NPH6 170 aa11.36□□□□□ -0.59
POLR1B-209ENST00000448770 TRAV3A0A0B4J244 114 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 IGHV3-13P01766 116 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 IGHV3-7P01780 117 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 CATR1Q13166 79 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 SLC10A1Q14973 349 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 TEX38Q6PEX7 206 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 WDR82Q6UXN9 313 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 C2orf88Q9BSF0 95 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 DDA1Q9BW61 102 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 VENTXO95231 258 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 HNF1AP20823 631 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 SRP14P37108 136 aaKnown RBP11.35□□□□□ -0.59
POLR1B-209ENST00000448770 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 GBGT1Q8N5D6 347 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 CISD2Q8N5K1 135 aaKnown RBP11.35□□□□□ -0.59
POLR1B-209ENST00000448770 NDUFAF3Q9BU61 184 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 MSL2Q9HCI7 577 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 NCOR1O75376 2440 aa11.35□□□□□ -0.59
POLR1B-209ENST00000448770 HCFC1P51610 2035 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms