RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 GOLT1AQ6ZVE7 132 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 SLC22A24Q8N4F4 322 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 ZNF615Q8N8J6 731 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 SPANXA2-OT1Q8N9U9 137 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 OR10K1Q8NGX5 313 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 RAB2BQ8WUD1 216 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 RTN4IP1Q8WWV3 396 aaPredicted RBP2.48□□□□□ -2.01
PMS1-216ENST00000447734 OR2D2Q9H210 308 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 LINC00574Q9H8X3 128 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 ZNF586Q9NXT0 402 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 TAS2R7Q9NYW3 318 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 SS18L2Q9UHA2 77 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 AK3Q9UIJ7 227 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 PHLDA3Q9Y5J5 127 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 SYNMO15061 1565 aa2.48□□□□□ -2.01
PMS1-216ENST00000447734 THSD7AQ9UPZ6 1657 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 hCG_1818297A0A087WSY0 165 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 VPS37CA5D8V6 355 aaPredicted RBP2.47□□□□□ -2.01
PMS1-216ENST00000447734 A6NED7 52 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 A8MT66 165 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 PIRO00625 290 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 CGAP01215 116 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 LHBP01229 141 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 TRGV3P03979 118 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 NBEAP1P0C6P0 100 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 ZNF32P17041 273 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 ATP6V0CP27449 155 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 ERP29P30040 261 aaKnown RBP2.47□□□□□ -2.01
PMS1-216ENST00000447734 MPV17P39210 176 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 GABRA4P48169 554 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 NOVP48745 357 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 TAS2R45P59539 299 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 FGF12P61328 243 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 APOFQ13790 326 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 AKR1C8PQ5T2L2 129 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 SCXQ7RTU7 201 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 C12orf29Q8N999 325 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 ROPN1LQ96C74 230 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 IP6K3Q96PC2 410 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 TSPAN32Q96QS1 320 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 NMNAT3Q96T66 252 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 GPER1Q99527 375 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 NKX6-2Q9C056 277 aaPredicted RBP2.47□□□□□ -2.01
PMS1-216ENST00000447734 CCDC90BQ9GZT6 254 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 TAAR3PQ9P1P4 343 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 CELA1Q9UNI1 258 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 SLC35A3Q9Y2D2 325 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 NACADO15069 1562 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 MEGF6O75095 1541 aa2.47□□□□□ -2.01
PMS1-216ENST00000447734 TRAPPC13A5PLN9 417 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 ZNF729A6NN14 1252 aaPredicted RBP2.46□□□□□ -2.02
PMS1-216ENST00000447734 A8MUN3 132 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 A8MWP4 228 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 G3V2T6 193 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.46□□□□□ -2.02
PMS1-216ENST00000447734 LST1O00453 97 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 C8GP07360 202 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 CISD3P0C7P0 127 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 INAFM2P0DMQ5 153 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 S100GP29377 79 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 PHBP35232 272 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 RHOBP62745 196 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 C12orf74Q32Q52 190 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 TNFAIP8L3Q5GJ75 292 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 C9orf64Q5T6V5 341 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 GLT8D1Q68CQ7 371 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 UNQ9165/PRO28630Q6UXU0 137 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 ZNF664Q8N3J9 261 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 TMEM105Q8N8V8 129 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 ZNF439Q8NDP4 499 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 OR4K13Q8NH42 304 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 SGMS2Q8NHU3 365 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 ACOT12Q8WYK0 555 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 C1orf50Q9BV19 199 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 C1QTNF6Q9BXI9 259 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 RPUSD1Q9UJJ7 312 aaKnown RBP2.46□□□□□ -2.02
PMS1-216ENST00000447734 PRNDQ9UKY0 176 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 TRAPPC1Q9Y5R8 145 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 RFNGQ9Y644 331 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 TMEM56-RWDD3S4R434 201 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 TRIP11Q15643 1979 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 ITGB4P16144 1822 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 RTL1A6NKG5 1358 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 NUP155O75694 1391 aa2.46□□□□□ -2.02
PMS1-216ENST00000447734 KIAA1671Q9BY89 1806 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 AGRNO00468 2067 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 A0A1W2PQ67 120 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 MFSD11O43934 449 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 IGKV1D-33P01593 117 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 IGKV1-33P01594 117 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 C1QBP02746 253 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 IL4P05112 153 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 ZNF705DP0CH99 300 aaPredicted RBP2.45□□□□□ -2.02
PMS1-216ENST00000447734 CPMP14384 443 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 ALDH3A1P30838 453 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 ZNF140P52738 457 aaPredicted RBP2.45□□□□□ -2.02
PMS1-216ENST00000447734 GNG5P63218 68 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 CST6Q15828 149 aa2.45□□□□□ -2.02
PMS1-216ENST00000447734 IBA57Q5T440 356 aaKnown RBP2.45□□□□□ -2.02
PMS1-216ENST00000447734 ZFP2Q6ZN57 461 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms