RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 MBD6Q96DN6 1003 aa20.16■□□□□ 0.82
RFFL-206ENST00000447669 PRELID3BQ9Y3B1 194 aa20.16■□□□□ 0.82
RFFL-206ENST00000447669 OR11H6Q8NGC7 330 aa20.15■□□□□ 0.82
RFFL-206ENST00000447669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.15■□□□□ 0.822e-6■■□□□ 14.5
RFFL-206ENST00000447669 NABP2Q9BQ15 211 aa20.15■□□□□ 0.82
RFFL-206ENST00000447669 HEXA-AS1Q9H8Q6 139 aa20.15■□□□□ 0.82
RFFL-206ENST00000447669 HILPDAQ9Y5L2 63 aa20.15■□□□□ 0.82
RFFL-206ENST00000447669 FXYD6-FXYD2A0A087WZ82 144 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 H0YIZ8 118 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 ZNF137PP52743 207 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 S100A10P60903 97 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 TGIF2LXQ8IUE1 241 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 REG4Q9BYZ8 158 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 PLSCR3Q9NRY6 295 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 IGHV3OR16-10A0A075B7F0 116 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 MPC2O95563 127 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 MSMBP08118 114 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 SLC35D1Q9NTN3 355 aa20.14■□□□□ 0.81
RFFL-206ENST00000447669 AKAP9Q99996 3911 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 H0YJW9 148 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 LY6LH3BQJ8 138 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 PAX8Q06710 450 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 CXorf66Q5JRM2 361 aaPredicted RBP20.13■□□□□ 0.81
RFFL-206ENST00000447669 WFDC11Q8NEX6 87 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 R3HDM4Q96D70 268 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 UNKLQ9H9P5 680 aaKnown RBP20.13■□□□□ 0.81
RFFL-206ENST00000447669 COMMD9Q9P000 198 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 CACNG5Q9UF02 275 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 NSG2Q9Y328 171 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 ITPR3Q14573 2671 aa20.13■□□□□ 0.81
RFFL-206ENST00000447669 MARCH11A6NNE9 402 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 ODF3BA8MYP8 253 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 H7C2Y5 167 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 MBPP02686 304 aaPredicted RBP20.12■□□□□ 0.81
RFFL-206ENST00000447669 PSMB6P28072 239 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 TAGLNQ01995 201 aaKnown RBP20.12■□□□□ 0.81
RFFL-206ENST00000447669 LAMTOR1Q6IAA8 161 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 RRNAD1Q96FB5 475 aaKnown RBP20.12■□□□□ 0.81
RFFL-206ENST00000447669 RNF126Q9BV68 326 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 OR5AC2Q9NZP5 309 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 LSM5Q9Y4Y9 91 aaKnown RBP20.12■□□□□ 0.81
RFFL-206ENST00000447669 SRRM4A7MD48 611 aaKnown RBP20.12■□□□□ 0.81
RFFL-206ENST00000447669 HPRT1P00492 218 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 CYCSP99999 105 aaKnown RBP20.12■□□□□ 0.81
RFFL-206ENST00000447669 OR4D5Q8NGN0 318 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 CD300LFQ8TDQ1 290 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 ADTRPQ96IZ2 230 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 RITA1Q96K30 269 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 HIF1ANQ9NWT6 349 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 MBD2Q9UBB5 411 aa20.12■□□□□ 0.81
RFFL-206ENST00000447669 DUXBA0A1W2PPF3 345 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 IL3RAP26951 378 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 DYNAPQ8N1N2 210 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 TCTEX1D1Q8N7M0 179 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 OR5AN1Q8NGI8 311 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 OR4S2Q8NH73 311 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 RPEQ96AT9 228 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 HYLS1Q96M11 299 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 MAGT1Q9H0U3 335 aa20.11■□□□□ 0.81
RFFL-206ENST00000447669 HTR1DP28221 377 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 C11orf87Q6NUJ2 197 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 MOB3BQ86TA1 216 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 PLEKHA2Q9HB19 425 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 TRAV3A0A0B4J244 114 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 IGHV1-3A0A0C4DH29 117 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 B4DSR2 109 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 ARPC5O15511 151 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 P0C879 139 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 DMBX1Q8NFW5 382 aa20.1■□□□□ 0.81
RFFL-206ENST00000447669 LSM10Q969L4 123 aaKnown RBP20.1■□□□□ 0.81
RFFL-206ENST00000447669 TEX15Q9BXT5 2789 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 OR9G9P0C7N8 305 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 SSX2Q16385 188 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 ASB13Q8WXK3 278 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 FAM212BQ9NTI7 297 aaPredicted RBP20.09■□□□□ 0.81
RFFL-206ENST00000447669 DPM3Q9P2X0 92 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 MMP24Q9Y5R2 645 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 TNCP24821 2201 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 RBFOX2O43251 390 aaKnown RBP eCLIP20.09■□□□□ 0.812e-6■■□□□ 13
RFFL-206ENST00000447669 CD24P25063 80 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 KIR2DS2P43631 304 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 LGALSLQ3ZCW2 172 aaPredicted RBP20.09■□□□□ 0.81
RFFL-206ENST00000447669 TPTE2P1Q5T6R2 138 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 THOC7Q6I9Y2 204 aaKnown RBP20.09■□□□□ 0.81
RFFL-206ENST00000447669 H2BFWTQ7Z2G1 175 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 OR1S1Q8NH92 325 aa20.09■□□□□ 0.81
RFFL-206ENST00000447669 ABCA1O95477 2261 aa20.08■□□□□ 0.81
RFFL-206ENST00000447669 TET2Q6N021 2002 aaPredicted RBP20.08■□□□□ 0.8
RFFL-206ENST00000447669 CENPVL3A0A0U1RRI6 287 aa20.08■□□□□ 0.8
RFFL-206ENST00000447669 AVPP01185 164 aa20.08■□□□□ 0.8
RFFL-206ENST00000447669 POLR2GP62487 172 aaKnown RBP eCLIP20.08■□□□□ 0.8
RFFL-206ENST00000447669 LOXL1Q08397 574 aaPredicted RBP20.08■□□□□ 0.8
RFFL-206ENST00000447669 RTL8BQ17RB0 113 aa20.08■□□□□ 0.8
RFFL-206ENST00000447669 RUSC1-AS1Q66K80 236 aa20.08■□□□□ 0.8
RFFL-206ENST00000447669 FAM71F2Q6NXP2 309 aa20.08■□□□□ 0.8
RFFL-206ENST00000447669 CIARTQ8N365 385 aaPredicted RBP20.08■□□□□ 0.8
RFFL-206ENST00000447669 C9orf62Q8N4C0 152 aa20.08■□□□□ 0.8
RFFL-206ENST00000447669 C7orf69Q9H7B7 122 aa20.08■□□□□ 0.8
RFFL-206ENST00000447669 AMMECR1Q9Y4X0 333 aaPredicted RBP20.08■□□□□ 0.8
RFFL-206ENST00000447669 K7EPK0 472 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms