RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 KCNIP2Q9NS61 270 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 MED13Q9UHV7 2174 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 WNT9BO14905 357 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 ZNF883P0CG24 379 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 CD1BP29016 333 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 RPS16P62249 146 aaKnown RBP15.92■□□□□ 0.14
SDCBP-204ENST00000447182 GNB1P62873 340 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 Q6ZR03 302 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 TMEM144Q7Z5S9 345 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 KLF14Q8TD94 323 aaPredicted RBP15.92■□□□□ 0.14
SDCBP-204ENST00000447182 MRGPRDQ8TDS7 321 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 GMPPAQ96IJ6 420 aaPredicted RBP15.92■□□□□ 0.14
SDCBP-204ENST00000447182 OBP2BQ9NPH6 170 aa15.92■□□□□ 0.14
SDCBP-204ENST00000447182 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.91■□□□□ 0.14
SDCBP-204ENST00000447182 MPDU1O75352 247 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 TNFSF15O95150 251 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 DEFA4P12838 97 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 GABRA2P47869 451 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 CNN1P51911 297 aaKnown RBP15.91■□□□□ 0.14
SDCBP-204ENST00000447182 RPL15P61313 204 aaKnown RBP15.91■□□□□ 0.14
SDCBP-204ENST00000447182 CACNA1DQ01668 2161 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 TXNDC17Q9BRA2 123 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 NDUFAF3Q9BU61 184 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 DEFB127Q9H1M4 99 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 SPRR3Q9UBC9 169 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 PTPRBP23467 1997 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 A0A1W2PNU3 283 aaPredicted RBP15.91■□□□□ 0.14
SDCBP-204ENST00000447182 FAM90A9PA6NNJ1 464 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 F6UZH7 168 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 IFNL4K9M1U5 179 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 IGHV1-2P23083 117 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 IL3RAP26951 378 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 MPV17P39210 176 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 FOXL1Q12952 345 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 ZNF826PQ6ZT77 177 aa15.91■□□□□ 0.14
SDCBP-204ENST00000447182 TRGV5A0A0B4J1U4 118 aa15.9■□□□□ 0.14
SDCBP-204ENST00000447182 CHRNA7P36544 502 aa15.9■□□□□ 0.14
SDCBP-204ENST00000447182 PAX5Q02548 391 aa15.9■□□□□ 0.14
SDCBP-204ENST00000447182 SPINK9Q5DT21 86 aa15.9■□□□□ 0.14
SDCBP-204ENST00000447182 INO80CQ6PI98 192 aaPredicted RBP15.9■□□□□ 0.14
SDCBP-204ENST00000447182 GBGT1Q8N5D6 347 aa15.9■□□□□ 0.14
SDCBP-204ENST00000447182 QTRT1Q9BXR0 403 aaKnown RBP15.9■□□□□ 0.14
SDCBP-204ENST00000447182 CXXC4Q9H2H0 198 aa15.9■□□□□ 0.14
SDCBP-204ENST00000447182 WASF3Q9UPY6 502 aa15.9■□□□□ 0.14
SDCBP-204ENST00000447182 CD82P27701 267 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 HTD2P86397 168 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 Q3ZCU0 254 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 TMEM164Q5U3C3 297 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 FAM78BQ5VT40 261 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 R3HDM4Q96D70 268 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 TP53TG5Q9Y2B4 290 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 ZNF705GA8MUZ8 300 aaPredicted RBP15.89■□□□□ 0.13
SDCBP-204ENST00000447182 ADH4P08319 380 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 CD46P15529 392 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 SSTR5P35346 364 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 ATP5G3P48201 142 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 WDR82Q6UXN9 313 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 CXorf67Q86X51 503 aaPredicted RBP15.89■□□□□ 0.13
SDCBP-204ENST00000447182 OR13A1Q8NGR1 328 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 CHODLQ9H9P2 273 aa15.89■□□□□ 0.13
SDCBP-204ENST00000447182 TRAV38-1A0A0B4J264 116 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 C19orf67A6NJJ6 358 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 NDUFB4O95168 129 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 OR9G9P0C7N8 305 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 RNF224P0DH78 156 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 OPRK1P41145 380 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 RPP30P78346 268 aaKnown RBP15.88■□□□□ 0.13
SDCBP-204ENST00000447182 FOXF2Q12947 444 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 IQCJQ1A5X6 159 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 GCSAMLQ5JQS6 135 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 TRAT1Q6PIZ9 186 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 C1orf210Q8IVY1 113 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 PSG11Q9UQ72 335 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 PXMP4Q9Y6I8 212 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 A0A1W2PPV4 95 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 C15orf65H3BRN8 121 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 ST8SIA5O15466 376 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 CRYAAP02489 173 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 TMPRSS3P57727 454 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 LINC00205P59089 165 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 SPCS3P61009 180 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 PRSS8Q16651 343 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 CST9LP1Q5W188 147 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 OR5T1Q8NG75 326 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 MISP3Q96FF7 219 aa15.88■□□□□ 0.13
SDCBP-204ENST00000447182 SPINT2O43291 252 aa15.87■□□□□ 0.13
SDCBP-204ENST00000447182 DUTP33316 252 aaKnown RBP15.87■□□□□ 0.13
SDCBP-204ENST00000447182 TRIP6Q15654 476 aaKnown RBP15.87■□□□□ 0.13
SDCBP-204ENST00000447182 PDLIM3Q53GG5 364 aaPredicted RBP15.87■□□□□ 0.13
SDCBP-204ENST00000447182 RNFT1Q5M7Z0 435 aa15.87■□□□□ 0.13
SDCBP-204ENST00000447182 MRPL41Q8IXM3 137 aaKnown RBP15.87■□□□□ 0.13
SDCBP-204ENST00000447182 OR52E5Q8NH55 327 aa15.87■□□□□ 0.13
SDCBP-204ENST00000447182 FAM216AQ8WUB2 273 aa15.87■□□□□ 0.13
SDCBP-204ENST00000447182 FER1L6-AS2Q96M78 137 aa15.87■□□□□ 0.13
SDCBP-204ENST00000447182 ZDHHC11Q9H8X9 412 aa15.87■□□□□ 0.13
SDCBP-204ENST00000447182 TRAPPC1Q9Y5R8 145 aa15.87■□□□□ 0.13
SDCBP-204ENST00000447182 IGHV3-43A0A0B4J1X8 118 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 A0A0U1RQK1 487 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 ZNF320A2RRD8 509 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 LYZL6O75951 148 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms