RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ADTRPQ96IZ2 230 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 UBE2E2Q96LR5 201 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
USE1-202ENST00000445667 VSIG4Q9Y279 399 aa11.48□□□□□ -0.57
USE1-202ENST00000445667 PRKDCP78527 4128 aaKnown RBP11.48□□□□□ -0.57
USE1-202ENST00000445667 MEIS3P1A6NDR6 274 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 I3L521 148 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 TUSC2O75896 110 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 CRYZL1O95825 349 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 IGLV2-14P01704 120 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 RRASP10301 218 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 ARPC4P59998 168 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 VBP1P61758 197 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 GNB1P62873 340 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 RPL30P62888 115 aaKnown RBP11.47□□□□□ -0.57
USE1-202ENST00000445667 SSBP2P81877 361 aaPredicted RBP11.47□□□□□ -0.57
USE1-202ENST00000445667 CBX3Q13185 183 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 AKIRIN2Q53H80 203 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 ACTBL2Q562R1 376 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 HOGA1Q86XE5 327 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 SAMD12Q8N8I0 201 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 GRPEL2Q8TAA5 225 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 ARPC1AQ92747 370 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 S100A16Q96FQ6 103 aaKnown RBP11.47□□□□□ -0.57
USE1-202ENST00000445667 MS4A10Q96PG2 267 aa11.47□□□□□ -0.57
USE1-202ENST00000445667 RBMX2Q9Y388 322 aaKnown RBP11.47□□□□□ -0.57
USE1-202ENST00000445667 XRCC3O43542 346 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 FCGR3BO75015 233 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 CNIH1O95406 144 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 SMIM18P0DKX4 95 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 UBE2NLQ5JXB2 153 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 TCTEX1D1Q8N7M0 179 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 OR1N2Q8NGR9 330 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 OR13F1Q8NGS4 319 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 SLC25A46Q96AG3 418 aa11.46□□□□□ -0.57
USE1-202ENST00000445667 MCRIP2Q9BUT9 160 aaKnown RBP11.46□□□□□ -0.57
USE1-202ENST00000445667 ALX4Q9H161 411 aaPredicted RBP11.46□□□□□ -0.57
USE1-202ENST00000445667 SLC22A5O76082 557 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 AADACP22760 399 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 FCGR2CP31995 323 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 RUNX1Q01196 453 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 EGFEM1PQ0D2K5 195 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 MRGPRG-AS1Q2M3A8 158 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 OR2B11Q5JQS5 317 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 IDO2Q6ZQW0 420 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 OR5T1Q8NG75 326 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 OR5M8Q8NGP6 311 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 SNAPC3Q92966 411 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 GPHA2Q96T91 129 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 DCUN1D5Q9BTE7 237 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 NAA50Q9GZZ1 169 aaKnown RBP11.45□□□□□ -0.58
USE1-202ENST00000445667 TGP01266 2768 aa11.45□□□□□ -0.58
USE1-202ENST00000445667 CBX5P45973 191 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 TAS2R20P59543 309 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 UBE2KP61086 200 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 FHL3Q13643 280 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 VMA21Q3ZAQ7 101 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 TMEM69Q5SWH9 247 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 ASPHD1Q5U4P2 390 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 KCTD9Q7L273 389 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 TEX45Q8NA69 505 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 SECTM1Q8WVN6 248 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 DPF1Q92782 380 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 GPR61Q9BZJ8 451 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 CCL28Q9NRJ3 127 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 ZNF355PQ9NSJ1 428 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 TAS2R8Q9NYW2 309 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 COMMD3Q9UBI1 195 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 PRELID3BQ9Y3B1 194 aa11.44□□□□□ -0.58
USE1-202ENST00000445667 WI2-2373I1.2A0A1W2PRP0 233 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 K7EIL1 84 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 IGHV3-11P01762 117 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 EIF4EP06730 217 aaKnown RBP11.43□□□□□ -0.58
USE1-202ENST00000445667 APELAP0DMC3 54 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 BRWD1-AS2P59051 145 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 TPPP2P59282 170 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 ZNF616Q08AN1 781 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 EIF4EBP1Q13541 118 aaPredicted RBP11.43□□□□□ -0.58
USE1-202ENST00000445667 PYHIN1Q6K0P9 492 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 MFSD4AQ8N468 514 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 OR5AP2Q8NGF4 316 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 OSR1Q8TAX0 266 aaPredicted RBP11.43□□□□□ -0.58
USE1-202ENST00000445667 TCTEX1D2Q8WW35 142 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 IFT46Q9NQC8 304 aa11.43□□□□□ -0.58
USE1-202ENST00000445667 SEC14L6B5MCN3 397 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 TNFSF12O43508 249 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 PPYP01298 95 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 TRGV3P03979 118 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 SAA1P0DJI8 122 aaPredicted RBP11.42□□□□□ -0.58
USE1-202ENST00000445667 CD40LGP29965 261 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 FXYD4P59646 89 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 CDK10Q15131 360 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 TNXAQ16473 311 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 PRSS8Q16651 343 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 OVCH2Q7RTZ1 564 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 ANKRD13BQ86YJ7 626 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 VKORC1L1Q8N0U8 176 aa11.42□□□□□ -0.58
USE1-202ENST00000445667 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
USE1-202ENST00000445667 HSD17B10Q99714 261 aaKnown RBP11.42□□□□□ -0.58
USE1-202ENST00000445667 SLC5A7Q9GZV3 580 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms