RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SNRPCP09234 159 aaKnown RBP16.01■□□□□ 0.15
SHANK3-203ENST00000445220 LINC01590Q5TEZ4 76 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 ZNF385AQ96PM9 386 aaKnown RBP16.01■□□□□ 0.15
SHANK3-203ENST00000445220 C19orf24Q9BVV8 132 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 J3KRW8 73 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 RBFOX2O43251 390 aaKnown RBP eCLIP16■□□□□ 0.153e-7■■■■□ 24.9
SHANK3-203ENST00000445220 BTCP35070 178 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 HBBP68871 147 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 SPINK14Q6IE38 97 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 NEU1Q99519 415 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 SFXN3Q9BWM7 321 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 TRIP12Q14669 1992 aaPredicted RBP16■□□□□ 0.15
SHANK3-203ENST00000445220 C7orf71A4D174 169 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 C2orf83Q53S99 150 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 TMEM170AQ8WVE7 144 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 TMEM208Q9BTX3 173 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 SMOC1Q9H4F8 434 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 LIFP15018 202 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 RPS20P60866 119 aaKnown RBP16■□□□□ 0.15
SHANK3-203ENST00000445220 CENPWQ5EE01 88 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 KCNS1Q96KK3 526 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 ZNF430Q9H8G1 570 aaPredicted RBP16■□□□□ 0.15
SHANK3-203ENST00000445220 G6PC2Q9NQR9 355 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 PILRAQ9UKJ1 303 aa16■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BKO60814 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 ZG16O60844 167 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BJP06899 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 EGR1P18146 543 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BOP23527 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BBP33778 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 SSTR5P35346 364 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BDP58876 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BCP62807 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST2H2BEQ16778 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BHQ93079 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BNQ99877 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 HIST1H2BMQ99879 126 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 GCHFRP30047 84 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 RTP5Q14D33 572 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 SLC25A40Q8TBP6 338 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 CCL3P10147 92 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 TSPAN7P41732 249 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 FBLN7Q53RD9 439 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 INSIG2Q9Y5U4 225 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 CLDND2Q8NHS1 167 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 ZNF414Q96IQ9 312 aa15.99■□□□□ 0.15
SHANK3-203ENST00000445220 IGKV1-8A0A0C4DH67 115 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 NEUROG1Q92886 237 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 FGF16O43320 207 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 SRSF12Q8WXF0 261 aaKnown RBP15.98■□□□□ 0.15
SHANK3-203ENST00000445220 ZNF501Q96CX3 271 aaPredicted RBP15.98■□□□□ 0.15
SHANK3-203ENST00000445220 SPSB2Q99619 263 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 TTC9CQ8N5M4 171 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 IMMP2LQ96T52 175 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 C1RLQ9NZP8 487 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 C1QTNF9BB2RNN3 333 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 KRTCAP3Q53RY4 240 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 HES7Q9BYE0 225 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 NRXN2Q9P2S2 1712 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 SOX8P57073 446 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 ZNF818PQ6ZRF7 136 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 GPHA2Q96T91 129 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 JKAMPQ9P055 326 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
SHANK3-203ENST00000445220 A0A1B0GTI1 187 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 PSG4Q00888 419 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 SLC25A47Q6Q0C1 308 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 WDR31Q8NA23 367 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 OR4D5Q8NGN0 318 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 SSBP3Q9BWW4 388 aaPredicted RBP15.97■□□□□ 0.15
SHANK3-203ENST00000445220 VCX2Q9H322 139 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 PLAUP00749 431 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 LGALS3P17931 250 aaKnown RBP15.97■□□□□ 0.15
SHANK3-203ENST00000445220 SRSF3P84103 164 aaKnown RBP15.97■□□□□ 0.15
SHANK3-203ENST00000445220 PSMG4Q5JS54 123 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 TMEM106BQ9NUM4 274 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 IGHV3-21A0A0B4J1V1 117 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 OR11H12B2RN74 326 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 OR11H1Q8NG94 326 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 OR11H2Q8NH07 326 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 PLSCR2Q9NRY7 297 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 IL11P20809 199 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 RPL31P62899 125 aaKnown RBP15.97■□□□□ 0.15
SHANK3-203ENST00000445220 LURAP1LQ8IV03 231 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 SFTPA2Q8IWL1 248 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 RND1Q92730 232 aa15.97■□□□□ 0.15
SHANK3-203ENST00000445220 MGST3O14880 152 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 PRDX2P32119 198 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 ST6GALNAC6Q969X2 333 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 ZNF638Q14966 1978 aaKnown RBP15.96■□□□□ 0.15
SHANK3-203ENST00000445220 A0A1W2PPE3 182 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 TSPAN13O95857 204 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 OR2H2O95918 312 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 HSPE1P61604 102 aaKnown RBP15.96■□□□□ 0.15
SHANK3-203ENST00000445220 MESP2Q0VG99 397 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 C10orf126Q8N4M7 172 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 PRSS2P07478 247 aa15.96■□□□□ 0.15
SHANK3-203ENST00000445220 ZNF324BQ6AW86 544 aaPredicted RBP15.96■□□□□ 0.15
SHANK3-203ENST00000445220 MRPL32Q9BYC8 188 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms