RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 PRSS23O95084 383 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 SERF2P84101 59 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 VAMP3Q15836 100 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 AANATQ16613 207 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 OR2D3Q8NGH3 330 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 GALNT14Q96FL9 552 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 LHFPL6Q9Y693 200 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 A0A0B4J293 547 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 EWSR1Q01844 656 aaKnown RBP eCLIP9.63□□□□□ -0.87
FN1-211ENST00000443816 PNKDQ8N490 385 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 OR4B1Q8NGF8 309 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 PARD6AQ9NPB6 346 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 NIT2Q9NQR4 276 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 RECKO95980 971 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 ZP3P21754 424 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 MAS1LP35410 378 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 DSCR9P59020 149 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 NEURL2Q9BR09 285 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 FABP4P15090 132 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 CTHRC1Q96CG8 243 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 DLL3Q9NYJ7 618 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 FAM74A7A6NL05 159 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 ICMTO60725 284 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 SCTP09683 121 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 VWA1Q6PCB0 445 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 GDF9O60383 454 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 CEBPDP49716 269 aaPredicted RBP9.63□□□□□ -0.87
FN1-211ENST00000443816 LDLRAD3Q86YD5 345 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 CBLN4Q9NTU7 201 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 KLHDC2Q9Y2U9 406 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 PXMP4Q9Y6I8 212 aa9.63□□□□□ -0.87
FN1-211ENST00000443816 IGKV3-11P04433 115 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 IGSF11Q5DX21 431 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 MS4A10Q96PG2 267 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 LPAR5Q9H1C0 372 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 ZMAT5Q9UDW3 170 aaKnown RBP9.62□□□□□ -0.87
FN1-211ENST00000443816 CHCHD2Q9Y6H1 151 aaPredicted RBP9.62□□□□□ -0.87
FN1-211ENST00000443816 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 BSXQ3C1V8 233 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 DHRS11Q6UWP2 260 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 MEGF10Q96KG7 1140 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 ZNF430Q9H8G1 570 aaPredicted RBP9.62□□□□□ -0.87
FN1-211ENST00000443816 RCC2Q9P258 522 aaKnown RBP9.62□□□□□ -0.87
FN1-211ENST00000443816 TGFAP01135 160 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 FXYD3Q14802 87 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 NOTCH4Q99466 2003 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 LINC00869P0C866 280 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 PMS2P11Q13670 270 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 C8orf82Q6P1X6 216 aaPredicted RBP9.62□□□□□ -0.87
FN1-211ENST00000443816 M0R3E3 92 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 TRGV3P03979 118 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
FN1-211ENST00000443816 NRN1LQ496H8 165 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 RHOVQ96L33 236 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 WNT5BQ9H1J7 359 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 LOC390937A0A1W2PQ73 354 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 CGB1A6NKQ9 187 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 ELOBQ15370 118 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 CLLU1Q5K131 121 aa9.62□□□□□ -0.87
FN1-211ENST00000443816 LSM10Q969L4 123 aaKnown RBP9.62□□□□□ -0.87
FN1-211ENST00000443816 A8MWL6 223 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 APCSP02743 223 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 DLX6P56179 175 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 FAM27E3Q08E93 113 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 NPFFR1Q9GZQ6 430 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 ZNF146Q15072 292 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 ROS1P08922 2347 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 PEMTQ9UBM1 199 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 IGHV3OR16-10A0A075B7F0 116 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 ATP5IP56385 69 aaPredicted RBP9.61□□□□□ -0.87
FN1-211ENST00000443816 OVCH2Q7RTZ1 564 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 METRNQ9UJH8 293 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 KCNK7Q9Y2U2 307 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 SPTAN1Q13813 2472 aaKnown RBP9.61□□□□□ -0.87
FN1-211ENST00000443816 E9PLN8 166 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 C10orf128Q5T292 105 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 VKORC1Q9BQB6 163 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 FAM90A26D6RGX4 464 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 HERPUD1Q15011 391 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 ZIC4Q8N9L1 334 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 TMEM140Q9NV12 185 aa9.61□□□□□ -0.87
FN1-211ENST00000443816 TMEM8BA6NDV4 472 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 M0QZK8 103 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 CSN3P07498 182 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 VDAC2P45880 294 aaPredicted RBP9.6□□□□□ -0.87
FN1-211ENST00000443816 MVDP53602 400 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 CLEC9AQ6UXN8 241 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 MRPL24Q96A35 216 aaKnown RBP9.6□□□□□ -0.87
FN1-211ENST00000443816 C19orf24Q9BVV8 132 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 RBKSQ9H477 322 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 DPM3Q9P2X0 92 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 GPX1P07203 203 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 NANOS3P60323 173 aaKnown RBP9.6□□□□□ -0.87
FN1-211ENST00000443816 IGLV3-21P80748 117 aaPredicted RBP9.6□□□□□ -0.87
FN1-211ENST00000443816 LY6DQ14210 128 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 SHANK1Q9Y566 2161 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 ERVS71-1P61550 626 aa9.6□□□□□ -0.87
FN1-211ENST00000443816 OR5P3Q8WZ94 311 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms