RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 RPS16P62249 146 aaKnown RBP10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 THNSL2Q86YJ6 484 aa10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 FLYWCH2Q96CP2 140 aaKnown RBP10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 RITA1Q96K30 269 aa10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 RTBDNQ9BSG5 229 aaPredicted RBP10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 C20orf85Q9H1P6 137 aa10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 NAA60Q9H7X0 242 aa10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 MOB4Q9Y3A3 225 aa10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 FN1P02751 2386 aaKnown RBP10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 MXRA5Q9NR99 2828 aa10.85□□□□□ -0.67
TM9SF4-204ENST00000442842 SONP18583 2426 aaKnown RBP10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 TRAV6A0A075B6T7 132 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 A0A0A6YYJ9 748 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 SHOXO15266 292 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 MPPED1O15442 326 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 OR2F2O95006 317 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 S1PR2O95136 353 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 RNASE1P07998 156 aaKnown RBP10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 F2RP25116 425 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 TAGLNQ01995 201 aaKnown RBP10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 DCTN2Q13561 401 aaKnown RBP10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 PLGLAQ15195 96 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 DHRS7BQ6IAN0 325 aaPredicted RBP10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 CENPSQ8N2Z9 138 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 Q8N6K4 173 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 TMEM230Q96A57 120 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 RBM14Q96PK6 669 aaKnown RBP10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 KIAA1456Q9P272 454 aa10.84□□□□□ -0.67
TM9SF4-204ENST00000442842 C3orf85A0A1B0GTC6 90 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 CRYM-AS1A6NIL9 109 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 SH2D7A6NKC9 451 aaPredicted RBP10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 H0Y980 276 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 CLDN34H7C241 214 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 TRIM77I1YAP6 450 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 TCRBP04435 133 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 ANXA7P20073 488 aaKnown RBP10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 SLC6A1P30531 599 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 F2RL1P55085 397 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 EBI3Q14213 229 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 TRIM16LQ309B1 348 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 SP6Q3SY56 376 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 LIAT1Q6ZQX7 453 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 NRARPQ7Z6K4 114 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 SGPP2Q8IWX5 399 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 OR4C13Q8NGP0 309 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 TP53RKQ96S44 253 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 BEX1Q9HBH7 125 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 RAB18Q9NP72 206 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 PALMDQ9NP74 551 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 NUDT15Q9NV35 164 aa10.83□□□□□ -0.68
TM9SF4-204ENST00000442842 FAM181BA6NEQ2 426 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 NBR2O15453 112 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 SERPINE2P07093 398 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 OR5AC1P0C628 307 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 VSIG10L2P0DP72 767 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 RPA2P15927 270 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 VAMP1P23763 118 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 LPAR6P43657 344 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 BRWD1-AS2P59051 145 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 TAS2R31P59538 309 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 TMEM177Q53S58 311 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 C9orf152Q5JTZ5 239 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 SSX9Q7RTT3 188 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 C16orf82Q7Z2V1 217 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 VKORC1L1Q8N0U8 176 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 CD300LFQ8TDQ1 290 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.681e-7■□□□□ 8.1
TM9SF4-204ENST00000442842 TSNAXQ99598 290 aaKnown RBP10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 NUBP2Q9Y5Y2 271 aa10.82□□□□□ -0.68
TM9SF4-204ENST00000442842 SLC25A17O43808 307 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 HPRT1P00492 218 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 CRYBA1P05813 215 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 ANXA3P12429 323 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 RAB25P57735 213 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 PPP1R1AQ13522 171 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 PSG5Q15238 335 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 VMA21Q3ZAQ7 101 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 ARSJQ5FYB0 599 aaPredicted RBP10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 C11orf88Q6PI97 169 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 PRIMA1Q86XR5 153 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 C5orf56Q8N8D9 126 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 DMBX1Q8NFW5 382 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 OR8H1Q8NGG4 311 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 OSR1Q8TAX0 266 aaPredicted RBP10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 CASTOR1Q8WTX7 329 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 CLCC1Q96S66 551 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 RASL11BQ9BPW5 248 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 FBXL15Q9H469 300 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 TPSG1Q9NRR2 321 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 C1RLQ9NZP8 487 aa10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 TEP1Q99973 2627 aaKnown RBP10.81□□□□□ -0.68
TM9SF4-204ENST00000442842 SRRM4A7MD48 611 aaKnown RBP10.8□□□□□ -0.68
TM9SF4-204ENST00000442842 RRHO14718 337 aa10.8□□□□□ -0.68
TM9SF4-204ENST00000442842 RBFOX2O43251 390 aaKnown RBP eCLIP10.8□□□□□ -0.68
TM9SF4-204ENST00000442842 SPDEFO95238 335 aa10.8□□□□□ -0.68
TM9SF4-204ENST00000442842 HLA-AP01891 365 aaKnown RBP10.8□□□□□ -0.68
TM9SF4-204ENST00000442842 H2AFB2P0C5Z0 115 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms