RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 UXS1Q8NBZ7 420 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 OR13C5Q8NGS8 318 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 KIR2DL5BQ8NHK3 375 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 C11orf45Q8TAV5 145 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 SLC35D1Q9NTN3 355 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 SMPD3Q9NY59 655 aaPredicted RBP10.29□□□□□ -0.76
LINC00642-202ENST00000442515 OR1A1Q9P1Q5 309 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 AASSQ9UDR5 926 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 FBXL7Q9UJT9 491 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
LINC00642-202ENST00000442515 TRAV8-7A0A075B6U6 113 aa10.28□□□□□ -0.76
LINC00642-202ENST00000442515 A8MWP6 167 aa10.28□□□□□ -0.76
LINC00642-202ENST00000442515 FCGR2BP31994 310 aaPredicted RBP10.28□□□□□ -0.76
LINC00642-202ENST00000442515 SNRPGP62308 76 aaKnown RBP10.28□□□□□ -0.76
LINC00642-202ENST00000442515 GPHB5Q86YW7 130 aa10.28□□□□□ -0.76
LINC00642-202ENST00000442515 NECAP1Q8NC96 275 aa10.28□□□□□ -0.76
LINC00642-202ENST00000442515 SRSF12Q8WXF0 261 aaKnown RBP10.28□□□□□ -0.76
LINC00642-202ENST00000442515 UBQLN2Q9UHD9 624 aa10.28□□□□□ -0.76
LINC00642-202ENST00000442515 EXOSC1Q9Y3B2 195 aaKnown RBP10.28□□□□□ -0.76
LINC00642-202ENST00000442515 ZNF320A2RRD8 509 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 SNTNA6NMZ2 147 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 IGLL5B9A064 214 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 M0R1X1 148 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 RTL8CO15255 209 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 OR2J3O76001 311 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 RPL35AP18077 110 aaKnown RBP10.27□□□□□ -0.77
LINC00642-202ENST00000442515 CEACAM6P40199 344 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 MAP2K4P45985 399 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 TNXAQ16473 311 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 FAM209BQ5JX69 171 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 RPL22L1Q6P5R6 122 aaKnown RBP10.27□□□□□ -0.77
LINC00642-202ENST00000442515 ZNF880Q6PDB4 577 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 SETD6Q8TBK2 473 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 C11orf68Q9H3H3 251 aaKnown RBP10.27□□□□□ -0.77
LINC00642-202ENST00000442515 CKLFQ9UBR5 152 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 ZNF221Q9UK13 617 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 ORC6Q9Y5N6 252 aa10.27□□□□□ -0.77
LINC00642-202ENST00000442515 TRAV25A0A0B4J276 109 aa10.26□□□□□ -0.77
LINC00642-202ENST00000442515 SRRM4A7MD48 611 aaKnown RBP10.26□□□□□ -0.77
LINC00642-202ENST00000442515 NAPSAO96009 420 aa10.26□□□□□ -0.77
LINC00642-202ENST00000442515 RBPMS2Q6ZRY4 209 aaKnown RBP10.26□□□□□ -0.77
LINC00642-202ENST00000442515 MOB1BQ7L9L4 216 aa10.26□□□□□ -0.77
LINC00642-202ENST00000442515 ZNF575Q86XF7 245 aa10.26□□□□□ -0.77
LINC00642-202ENST00000442515 DHRSXQ8N5I4 330 aa10.26□□□□□ -0.77
LINC00642-202ENST00000442515 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
LINC00642-202ENST00000442515 PTX4Q96A99 478 aa10.26□□□□□ -0.77
LINC00642-202ENST00000442515 FAAP24Q9BTP7 215 aa10.26□□□□□ -0.77
LINC00642-202ENST00000442515 CHMP1AQ9HD42 196 aaPredicted RBP10.26□□□□□ -0.77
LINC00642-202ENST00000442515 TRBV5-5A0A0J9YX44 114 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 SHOXO15266 292 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 IGHV3-23P01764 117 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 ZBTB25P24278 435 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 ARL3P36405 182 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 MFAP2P55001 183 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 PRSS8Q16651 343 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 ODF3L2Q3SX64 289 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 CCDC58Q4VC31 144 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 C6orf201Q7Z4U5 140 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 SLC38A6Q8IZM9 456 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 CCDC140Q96MF4 163 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 NEDD4LQ96PU5 975 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 MAP6D1Q9H9H5 199 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 AMBNQ9NP70 447 aa10.25□□□□□ -0.77
LINC00642-202ENST00000442515 S1PR2O95136 353 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 HLA-DRB3P79483 266 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 FAM106AQ4KMX7 169 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 TMEM177Q53S58 311 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 TTC23Q5W5X9 447 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 OR4A47Q6IF82 309 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 IDO2Q6ZQW0 420 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 TTC9CQ8N5M4 171 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 OR52I1Q8NGK6 324 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 ACOT12Q8WYK0 555 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 SMIM19Q96E16 107 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 SPAG8Q99932 426 aaPredicted RBP10.24□□□□□ -0.77
LINC00642-202ENST00000442515 RARRES2Q99969 163 aa10.24□□□□□ -0.77
LINC00642-202ENST00000442515 LIMS3P0CW19 117 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 LIMS4P0CW20 117 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 GABRB1P18505 474 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 UBE2KP61086 200 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 MED22Q15528 200 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 Q499Y3 187 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 C10orf55Q5SWW7 151 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 GLT8D1Q68CQ7 371 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 CLEC19AQ6UXS0 136 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 UNQ9165/PRO28630Q6UXU0 137 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 C19orf35Q6ZS72 473 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.23□□□□□ -0.77
LINC00642-202ENST00000442515 ZNF555Q8NEP9 628 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 CNBD2Q96M20 576 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 SPIN2AQ99865 258 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 SPIN2BQ9BPZ2 258 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 S4R3C0 116 aa10.23□□□□□ -0.77
LINC00642-202ENST00000442515 A0A1W2PPK0 400 aa10.22□□□□□ -0.77
LINC00642-202ENST00000442515 DEFB4AO15263 64 aa10.22□□□□□ -0.77
LINC00642-202ENST00000442515 C8orf88P0DMB2 117 aa10.22□□□□□ -0.77
LINC00642-202ENST00000442515 RPS11P62280 158 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC00642-202ENST00000442515 CBX3Q13185 183 aa10.22□□□□□ -0.77
LINC00642-202ENST00000442515 VMA21Q3ZAQ7 101 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms