RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 C2orf48Q96LS8 159 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 NIPSNAP3BQ9BS92 247 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM59Q9BXS4 323 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 NOX3Q9HBY0 568 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 BET1LQ9NYM9 111 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 CCDC88CQ9P219 2028 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 COL4A3Q01955 1670 aa8.73□□□□□ -1.01
SYNE2-206ENST00000441438 TCF20Q9UGU0 1960 aaKnown RBP8.73□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF593O00488 134 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-206ENST00000441438 SIX6O95475 246 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF728P0DKX0 622 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 BCKDHAP12694 445 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 CD59P13987 128 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 MYOD1P15172 320 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 CTBP2P56545 445 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 PMAIP1Q13794 54 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 OPCMLQ14982 345 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 TSSK6Q9BXA6 273 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 ULBP3Q9BZM4 244 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 IFI27L2Q9H2X8 130 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 CYSLTR1Q9Y271 337 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF443Q9Y2A4 671 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-206ENST00000441438 INSIG2Q9Y5U4 225 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 SLC25A14O95258 325 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-206ENST00000441438 GNB3P16520 340 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 FABP5Q01469 135 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 FOXF2Q12947 444 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 FHL5Q5TD97 284 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 LEG1Q6P5S2 330 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 GAPTQ8N292 157 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 ZPLD1Q8TCW7 415 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 MOB1AQ9H8S9 216 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 LOC730098B7Z3J9 87 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 H7C1C5 153 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 SULT2B1O00204 365 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 PRYO14603 147 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 SNRPGP62308 76 aaKnown RBP8.72□□□□□ -1.01
SYNE2-206ENST00000441438 LCN6P62502 163 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 GRB2P62993 217 aaKnown RBP8.72□□□□□ -1.01
SYNE2-206ENST00000441438 PSG9Q00887 426 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 TGIF2LYQ8IUE0 185 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 C1orf158Q8N1D5 194 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 Q8TCH9 128 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF837Q96EG3 531 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-206ENST00000441438 APOOQ9BUR5 198 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 ATG5Q9H1Y0 275 aa8.72□□□□□ -1.01
SYNE2-206ENST00000441438 CDC14CA4D256 554 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM212A6NML5 194 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 H0YJW9 148 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 GABRPO00591 440 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 ERGP11308 486 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 IL9P15248 144 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 WT1P19544 449 aaPredicted RBP8.71□□□□□ -1.01
SYNE2-206ENST00000441438 CXCL2P19875 107 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 HMGA2P52926 109 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 MMDQ15546 238 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 UBE2V2Q15819 145 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 SBSNQ6UWP8 590 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 LCNL1Q6ZST4 164 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 HSD11B1LQ7Z5J1 315 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 STPG3Q8N7X2 389 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 OR10G2Q8NGC3 310 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 MFSD8Q8NHS3 518 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 BORCS7Q96B45 105 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 CARD19Q96LW7 228 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 KLHL13Q9P2N7 655 aa8.71□□□□□ -1.01
SYNE2-206ENST00000441438 LAMA1P25391 3075 aa8.71□□□□□ -1.02
SYNE2-206ENST00000441438 MUC22E2RYF6 1773 aaPredicted RBP8.71□□□□□ -1.02
SYNE2-206ENST00000441438 C7orf71A4D174 169 aa8.71□□□□□ -1.02
SYNE2-206ENST00000441438 RENP00797 406 aa8.71□□□□□ -1.02
SYNE2-206ENST00000441438 IL3P08700 152 aa8.71□□□□□ -1.02
SYNE2-206ENST00000441438 RPS27AP62979 156 aaKnown RBP8.71□□□□□ -1.02
SYNE2-206ENST00000441438 KIAA1644Q3SXP7 199 aa8.71□□□□□ -1.02
SYNE2-206ENST00000441438 TSLPQ969D9 159 aa8.71□□□□□ -1.02
SYNE2-206ENST00000441438 TMEM106AQ96A25 262 aa8.71□□□□□ -1.02
SYNE2-206ENST00000441438 DUSP13Q9UII6 198 aa8.71□□□□□ -1.02
SYNE2-206ENST00000441438 TRANK1O15050 2925 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-206ENST00000441438 K7EPK0 472 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 M0R1B8 84 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 LYRM1O43325 122 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 IGLV3-27P01718 113 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 CATR1Q13166 79 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 PYDC2Q56P42 97 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 ENTPD8Q5MY95 495 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 Q5XG85 94 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 FAM71E2Q8N5Q1 922 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 OR4C3Q8NH37 302 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 KIR2DL4Q99706 377 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 ASF1AQ9Y294 204 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 hADV38S2A0JD32 116 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 C7orf66A4D0T2 115 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 CD14P08571 375 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 PLA2G5P39877 138 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 CRYBA2P53672 197 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 RBM11P57052 281 aaKnown RBP8.7□□□□□ -1.02
SYNE2-206ENST00000441438 HGFACQ04756 655 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 MEPEQ9NQ76 525 aaPredicted RBP8.7□□□□□ -1.02
SYNE2-206ENST00000441438 OARD1Q9Y530 152 aa8.7□□□□□ -1.02
SYNE2-206ENST00000441438 SOX21Q9Y651 276 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms