RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PACRGQ96M98 296 aaPredicted RBP1.49□□□□□ -2.17
PFDN4-202ENST00000441080 NAA38Q9BRA0 125 aaKnown RBP1.49□□□□□ -2.17
PFDN4-202ENST00000441080 TMEM109Q9BVC6 243 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 MS4A6AQ9H2W1 248 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 WDR54Q9H977 334 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 KLK5Q9Y337 293 aaPredicted RBP1.49□□□□□ -2.17
PFDN4-202ENST00000441080 GRIN2BQ13224 1484 aa1.49□□□□□ -2.17
PFDN4-202ENST00000441080 IGHV3-64A0A075B6Q5 118 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 C5orf49A4QMS7 147 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 FABP12A6NFH5 140 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 A8MUN3 132 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 M0QX08 132 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 CALUO43852 315 aaPredicted RBP1.48□□□□□ -2.17
PFDN4-202ENST00000441080 HPGDSO60760 199 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 HLA-DQB2P05538 268 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 MAGEA12P43365 314 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 TBPL1P62380 186 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 OR10K2Q6IF99 312 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 FUNDC1Q8IVP5 155 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 NMNAT3Q96T66 252 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 C7orf50Q9BRJ6 194 aaKnown RBP1.48□□□□□ -2.17
PFDN4-202ENST00000441080 SPANXB1Q9NS25 103 aaPredicted RBP1.48□□□□□ -2.17
PFDN4-202ENST00000441080 BABAM2Q9NXR7 383 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 CFAP45Q9UL16 551 aa1.48□□□□□ -2.17
PFDN4-202ENST00000441080 SLX4Q8IY92 1834 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 DSCAMO60469 2012 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 A0A087WUU8 490 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 OCMP0CE72 109 aaPredicted RBP1.47□□□□□ -2.17
PFDN4-202ENST00000441080 HIST1H1CP16403 213 aaKnown RBP1.47□□□□□ -2.17
PFDN4-202ENST00000441080 PSMB6P28072 239 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 CTBP2P56545 445 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 HLA-DRB3P79483 266 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 OR51T1Q8NGJ9 327 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 ASB13Q8WXK3 278 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 TTTY13Q9BZ97 58 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 C8orf4Q9NR00 106 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 COL4A1P02462 1669 aa1.47□□□□□ -2.17
PFDN4-202ENST00000441080 TMED7-TICAM2A0A0A6YYA0 188 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 TINCRA0A1B0GVN0 87 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 IL6P05231 212 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 UGT2B7P16662 529 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 IFNGR2P38484 337 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 FXYD7P58549 80 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 RPS24P62847 133 aaKnown RBP1.46□□□□□ -2.18
PFDN4-202ENST00000441080 JOSD1Q15040 202 aaPredicted RBP1.46□□□□□ -2.18
PFDN4-202ENST00000441080 FAM201AQ5SY85 155 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 FAM19A5Q7Z5A7 132 aaPredicted RBP1.46□□□□□ -2.18
PFDN4-202ENST00000441080 HES4Q9HCC6 221 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 GMEB1Q9Y692 573 aa1.46□□□□□ -2.18
PFDN4-202ENST00000441080 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
PFDN4-202ENST00000441080 FN1P02751 2386 aaKnown RBP1.45□□□□□ -2.18
PFDN4-202ENST00000441080 FBN3Q75N90 2809 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 RAD50Q92878 1312 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 C9JCJ5 164 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 KLRC4O43908 158 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 PGLYRP1O75594 196 aaPredicted RBP1.45□□□□□ -2.18
PFDN4-202ENST00000441080 C1QCP02747 245 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 ANGP03950 147 aaKnown RBP1.45□□□□□ -2.18
PFDN4-202ENST00000441080 TAS2R20P59543 309 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 PLPPR5Q32ZL2 321 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 NAA40Q86UY6 237 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 GPHB5Q86YW7 130 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 ZNF675Q8TD23 568 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 RAB2BQ8WUD1 216 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 DNAJB3Q8WWF6 145 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 ASB17Q8WXJ9 295 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 DERL2Q9GZP9 239 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 VCX3BQ9H321 246 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 SDK1Q7Z5N4 2213 aa1.45□□□□□ -2.18
PFDN4-202ENST00000441080 NYNRINQ9P2P1 1898 aaKnown RBP1.45□□□□□ -2.18
PFDN4-202ENST00000441080 LINC00854A0A1B0GVQ3 168 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 ZNF705DP0CH99 300 aaPredicted RBP1.44□□□□□ -2.18
PFDN4-202ENST00000441080 ZNF705BP0CI00 300 aaPredicted RBP1.44□□□□□ -2.18
PFDN4-202ENST00000441080 UBE2G2P60604 165 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 FKBP1AP62942 108 aaKnown RBP1.44□□□□□ -2.18
PFDN4-202ENST00000441080 SKP1P63208 163 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 MIAQ16674 131 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 TMEM155Q4W5P6 130 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 LYZL1Q6UWQ5 148 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 OR1L8Q8NGR8 309 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 SLC7A6Q92536 515 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 SMIM19Q96E16 107 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 ANKRD36BP1Q96IX9 119 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 ZNF514Q96K75 400 aaPredicted RBP1.44□□□□□ -2.18
PFDN4-202ENST00000441080 DHRS9Q9BPW9 319 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 ZNHIT6Q9NWK9 470 aaKnown RBP1.44□□□□□ -2.18
PFDN4-202ENST00000441080 EURLQ9NYK6 297 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 SCN9AQ15858 1988 aa1.44□□□□□ -2.18
PFDN4-202ENST00000441080 THSD7AQ9UPZ6 1657 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 BIRC5O15392 142 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 CA5AP35218 305 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 CXCR4P61073 352 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 SAPCD1Q5SSQ6 148 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 TMEM42Q69YG0 159 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 ZNF705AQ6ZN79 300 aaPredicted RBP1.43□□□□□ -2.18
PFDN4-202ENST00000441080 PLEKHG7Q6ZR37 379 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 RASSF6Q6ZTQ3 369 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 RNF133Q8WVZ7 376 aa1.43□□□□□ -2.18
PFDN4-202ENST00000441080 TMA16Q96EY4 203 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms