RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CCL28Q9NRJ3 127 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 METTL1Q9UBP6 276 aaKnown RBP9.32□□□□□ -0.92
HSPG2-206ENST00000439717 KLK11Q9UBX7 282 aa9.32□□□□□ -0.92
HSPG2-206ENST00000439717 IGHV7-81A0A0B4J1V7 117 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 TNFSF8P32971 234 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 KIR2DS2P43631 304 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 TSPAN5P62079 268 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 RPL30P62888 115 aaKnown RBP9.31□□□□□ -0.92
HSPG2-206ENST00000439717 CD83Q01151 205 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 IL18Q14116 193 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 RNASE12Q5GAN4 147 aaKnown RBP9.31□□□□□ -0.92
HSPG2-206ENST00000439717 LPCAT3Q6P1A2 487 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 MFSD4AQ8N468 514 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 SMIM4Q8WVI0 70 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 TCTEX1D2Q8WW35 142 aa9.31□□□□□ -0.92
HSPG2-206ENST00000439717 DGCR14Q96DF8 476 aaKnown RBP9.31□□□□□ -0.92
HSPG2-206ENST00000439717 CITED2Q99967 270 aaPredicted RBP9.31□□□□□ -0.92
HSPG2-206ENST00000439717 TCRBV4S1A1TA0A5B7 111 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 FABP12A6NFH5 140 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 SLC25A17O43808 307 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 FCGR3BO75015 233 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 CRYZL1O95825 349 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 IGLV2-23P01705 113 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 IFNA6P05013 189 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 CRYGBP07316 175 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 CSF1P09603 554 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 VDAC1P21796 283 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 GNRHRP30968 328 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 S100A5P33763 92 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 TAS2R19P59542 299 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 DGCR2P98153 550 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 CATR1Q13166 79 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 RNASE10Q5GAN6 216 aaKnown RBP9.3□□□□□ -0.92
HSPG2-206ENST00000439717 TCTEX1D4Q5JR98 221 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 TEX38Q6PEX7 206 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 ZNF562Q6V9R5 426 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 PPP1R27Q86WC6 154 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 TMEM17Q86X19 198 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 TEX45Q8NA69 505 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 OR4S2Q8NH73 311 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 SOSTQ9BQB4 213 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 TAS2R8Q9NYW2 309 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 LINC00527Q9UJ94 153 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 TSSC4Q9Y5U2 329 aaPredicted RBP9.3□□□□□ -0.92
HSPG2-206ENST00000439717 TRRAPQ9Y4A5 3859 aa9.3□□□□□ -0.92
HSPG2-206ENST00000439717 DPPA5A6NC42 116 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 SRRM4A7MD48 611 aaKnown RBP9.29□□□□□ -0.92
HSPG2-206ENST00000439717 FCN1O00602 326 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 ATP6V0E1O15342 81 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 TNFSF12O43508 249 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 GSTZ1O43708 216 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-206ENST00000439717 CD74P04233 296 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 CD3DP04234 171 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 CRIP2P52943 208 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-206ENST00000439717 UCP3P55916 312 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 UBE2KP61086 200 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 CX3CL1P78423 397 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 CFHR3Q02985 330 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 VMA21Q3ZAQ7 101 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 C10orf99Q6UWK7 81 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 TREML4Q6UXN2 200 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 ZNF818PQ6ZRF7 136 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 ZNF329Q86UD4 541 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 CMTM1Q8IZ96 169 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 ARRDC1Q8N5I2 433 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 CD300LFQ8TDQ1 290 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 FXYD6Q9H0Q3 95 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 PARP11Q9NR21 331 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 ZFP57Q9NU63 452 aa9.29□□□□□ -0.92
HSPG2-206ENST00000439717 TET2Q6N021 2002 aaPredicted RBP9.29□□□□□ -0.92
HSPG2-206ENST00000439717 TRAV41A0A0B4J266 112 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 ADARB2-AS1A8MUL3 147 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 M0QYG6 137 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 GPR31O00270 319 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 RBFOX2O43251 390 aaKnown RBP eCLIP9.28□□□□□ -0.92
HSPG2-206ENST00000439717 CREBL2O60519 120 aaPredicted RBP9.28□□□□□ -0.92
HSPG2-206ENST00000439717 CA2P00918 260 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 IGHG4P01861 327 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 ELANEP08246 267 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 PTBP1P26599 531 aaKnown RBP eCLIP9.28□□□□□ -0.929e-7■■■■■ 27.4
HSPG2-206ENST00000439717 S100GP29377 79 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 TMEM267Q0VDI3 215 aaPredicted RBP9.28□□□□□ -0.92
HSPG2-206ENST00000439717 FOXE3Q13461 319 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 MEF2DQ14814 521 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 NSUN5P1Q3KNT7 163 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 OR2B11Q5JQS5 317 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 AADACL3Q5VUY0 350 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 SLC38A6Q8IZM9 456 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 TCTEX1D1Q8N7M0 179 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 RNF152Q8N8N0 203 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 POC5Q8NA72 575 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 OR4F17Q8NGA8 305 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 OR4F4Q96R69 305 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 CLCC1Q96S66 551 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 AIFM2Q9BRQ8 373 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 RSRP1Q9BUV0 290 aa9.28□□□□□ -0.92
HSPG2-206ENST00000439717 TINAGL1Q9GZM7 467 aaPredicted RBP9.28□□□□□ -0.92
HSPG2-206ENST00000439717 PGLYRP1O75594 196 aaPredicted RBP9.27□□□□□ -0.93
HSPG2-206ENST00000439717 RAB3DO95716 219 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms