RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 IGFL3Q6UXB1 125 aa7.21□□□□□ -1.25
HPS4-206ENST00000439453 MYPOPQ86VE0 399 aaPredicted RBP7.21□□□□□ -1.25
HPS4-206ENST00000439453 SPACA9Q96E40 222 aaPredicted RBP7.21□□□□□ -1.25
HPS4-206ENST00000439453 FER1L6-AS2Q96M78 137 aa7.21□□□□□ -1.25
HPS4-206ENST00000439453 AURKAIP1Q9NWT8 199 aaPredicted RBP7.21□□□□□ -1.25
HPS4-206ENST00000439453 IL36RNQ9UBH0 155 aa7.21□□□□□ -1.25
HPS4-206ENST00000439453 A0A1W2PR80 420 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 GRIFINA4D1Z8 144 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 SIAH2O43255 324 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 CD99P14209 185 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 FGF12P61328 243 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 PAFAH1B2P68402 229 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 RPL19P84098 196 aaKnown RBP7.21□□□□□ -1.26
HPS4-206ENST00000439453 PSG4Q00888 419 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 FOXL1Q12952 345 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 ZNF468Q5VIY5 522 aaPredicted RBP7.21□□□□□ -1.26
HPS4-206ENST00000439453 TCF23Q7RTU1 214 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 LINC01551Q86U37 167 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 ZDHHC23Q8IYP9 409 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 VPS25Q9BRG1 176 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 VAMP8Q9BV40 100 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 OR51B6Q9H340 312 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 TMEM38BQ9NVV0 291 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 NBPF19A0A087WUL8 3843 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 C11orf94C9JXX5 98 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 TCF21O43680 179 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 SERPINA7P05543 415 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 EDN3P14138 238 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 B4GALT1P15291 398 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 TXN2Q99757 166 aa7.21□□□□□ -1.26
HPS4-206ENST00000439453 ZNF71Q9NQZ8 489 aaPredicted RBP7.21□□□□□ -1.26
HPS4-206ENST00000439453 TNFSF11O14788 317 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 WNT2P09544 360 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 TFPI2P48307 235 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 FFAR4Q5NUL3 377 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 COL5A1-AS1Q5SY13 56 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 TMEM14EPQ6UXP3 125 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 C20orf204Q6ZNR8 217 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 NUFIP2Q7Z417 695 aaKnown RBP7.2□□□□□ -1.26
HPS4-206ENST00000439453 WNT5BQ9H1J7 359 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 ELOVL5Q9NYP7 299 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 TP53TG3Q9ULZ0 132 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 ZNF407Q9C0G0 2248 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 CLDN1O95832 211 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 CDKN1AP38936 164 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 PMP22Q01453 160 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 RAET1LQ5VY80 246 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 SGMS2Q8NHU3 365 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 HSPB9Q9BQS6 159 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 ZDHHC11Q9H8X9 412 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 ZFP30Q9Y2G7 519 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 GCN1Q92616 2671 aaKnown RBP7.2□□□□□ -1.26
HPS4-206ENST00000439453 YLPM1P49750 1951 aaKnown RBP7.2□□□□□ -1.26
HPS4-206ENST00000439453 EGR1P18146 543 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 COX5AP20674 150 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 GNG10P50151 68 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 RAB7AP51149 207 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 C11orf42Q8N5U0 333 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 FGFBP3Q8TAT2 258 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 VN1R17PQ8TDU5 208 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 OR2H1Q9GZK4 316 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 DNAJC4Q9NNZ3 241 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 PPP1R3CQ9UQK1 317 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 CHCHD2Q9Y6H1 151 aaPredicted RBP7.2□□□□□ -1.26
HPS4-206ENST00000439453 CACNA1DQ01668 2161 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 LRP5LA4QPB2 252 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 HS3ST1O14792 307 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 TMPRSS2O15393 492 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 YPEL3P61236 119 aaPredicted RBP7.2□□□□□ -1.26
HPS4-206ENST00000439453 SELENOTP62341 195 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 GNB1P62873 340 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 ZNF585BQ52M93 769 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 FBXW9Q5XUX1 488 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 ZNF709Q8N972 641 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 TMEM147Q9BVK8 224 aa7.2□□□□□ -1.26
HPS4-206ENST00000439453 RIMS4Q9H426 269 aaPredicted RBP7.2□□□□□ -1.26
HPS4-206ENST00000439453 RYDENQ9NUL5 291 aaKnown RBP7.2□□□□□ -1.26
HPS4-206ENST00000439453 C19orf25Q9UFG5 118 aaPredicted RBP7.2□□□□□ -1.26
HPS4-206ENST00000439453 CRYAAP02489 173 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 LINC00310P59036 64 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 SAXO1Q8IYX7 474 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 DEFB126Q9BYW3 111 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 FGF23Q9GZV9 251 aaPredicted RBP7.19□□□□□ -1.26
HPS4-206ENST00000439453 MTCH1Q9NZJ7 389 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 KIAA1549Q9HCM3 1950 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 SERF1AO75920 110 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 IGLV2-14P01704 120 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 CHRNB4P30926 498 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 NTF4P34130 210 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 GPM6AP51674 278 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 MLF1P58340 268 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 MSMO1Q15800 293 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 ATP6V1FQ16864 119 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 CPT1CQ8TCG5 803 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 SRXN1Q9BYN0 137 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 MSL2Q9HCI7 577 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 OR1A1Q9P1Q5 309 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 A0A0J9YW62 118 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 FAM90A26D6RGX4 464 aa7.19□□□□□ -1.26
HPS4-206ENST00000439453 TRAPPC2LH3BP13 241 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms